Assay Details
Target Gene Details
Entrez Gene ID: | 84690 |
Gene Name: | spermatogenesis associated 22 |
Gene Aliases: |
NYD-SP20, NYDSP20 |
Location: |
Chr.17:3440011-3513852 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPATA22 | NM_001321336.1 | NP_001308265.1 | ||
NM_001321337.1 | NP_001308266.1 | |||
AK295299.1 |
Target Gene Details
Entrez Gene ID: | 162514 |
Gene Name: | transient receptor potential cation channel subfamily V member 3 |
Gene Aliases: |
FNEPPK2, OLMS, VRL3 |
Location: |
Chr.17:3510502-3557995 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRPV3 | NM_001258205.1 | 18 | 4482 | NP_001245134.1 |
NM_145068.3 | 18 | 4479 | NP_659505.1 | |
AK127330.1 | 6 | 2478 | ||
AK127726.1 | 12 | 3431 | ||
BX537539.1 | 12 | 3419 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3892950 | Chr.17:3131812 - 3577153 on Build GRCh38 | Loss |
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nsv574237 | Chr.17:3486822 - 3729542 on Build GRCh38 | Loss |
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nsv1065489 | Chr.17:2631416 - 3948349 on Build GRCh38 | Gain |
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esv23898 | Chr.17:3511464 - 3512895 on Build GRCh38 | Gain |
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esv2660206 | Chr.17:2679367 - 3519614 on Build GRCh38 | Deletion |
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nsv1055740 | Chr.17:3381841 - 3890153 on Build GRCh38 | Gain |
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nsv833341 | Chr.17:3352243 - 3521390 on Build GRCh38 | Loss |
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nsv1060071 | Chr.17:3398474 - 3633472 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs76456640] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)