Assay Details
Target Gene Details
Entrez Gene ID: | 27164 |
Gene Name: | spalt like transcription factor 3 |
Gene Aliases: |
ZNF796 |
Location: |
Chr.18:78980275-78998969 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SALL3 | NM_171999.3 | NP_741996.2 | ||
BC148296.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1071874 | Chr.18:78978999 - 78980600 on Build GRCh38 | Deletion | SALL3 |
nsv577821 | Chr.18:78980085 - 78994367 on Build GRCh38 | Loss | SALL3 |
nsv1133432 | Chr.18:78976800 - 78980600 on Build GRCh38 | Deletion | SALL3 |
nsv1143887 | Chr.18:78978700 - 78980600 on Build GRCh38 | Deletion | SALL3 |
nsv577793 | Chr.18:78951024 - 79022312 on Build GRCh38 | Loss | SALL3 |
esv2666555 | Chr.18:78977945 - 78981392 on Build GRCh38 | Deletion | SALL3 |
nsv577795 | Chr.18:78972221 - 79050030 on Build GRCh38 | Loss | SALL3 |
nsv577796 | Chr.18:78978993 - 78980500 on Build GRCh38 | Loss | SALL3 |
dgv564n67 | Chr.18:78952775 - 79013936 on Build GRCh38 | Gain | SALL3 |
nsv828342 | Chr.18:78976549 - 78983544 on Build GRCh38 | Gain | SALL3 |
dgv6103n54 | Chr.18:78979851 - 78980976 on Build GRCh38 | Loss | SALL3 |
nsv828338 | Chr.18:78963814 - 79001729 on Build GRCh38 | Gain | SALL3 |
dgv6104n54 | Chr.18:78980034 - 78980976 on Build GRCh38 | Gain+Loss | SALL3 |
esv2717497 | Chr.18:78170182 - 79635788 on Build GRCh38 | Deletion | NFATC1 ATP9B LOC107985149 LOC100996274 LOC284240 SALL3 |
nsv1141945 | Chr.18:78170394 - 79635820 on Build GRCh38 | Deletion | NFATC1 ATP9B LOC107985149 LOC100996274 LOC284240 SALL3 |
dgv565n67 | Chr.18:78974294 - 78993921 on Build GRCh38 | Gain | SALL3 |
dgv6101n54 | Chr.18:78979457 - 78980923 on Build GRCh38 | Gain | SALL3 |
nsv828333 | Chr.18:78955949 - 79017302 on Build GRCh38 | Loss | SALL3 |
nsv577794 | Chr.18:78951366 - 79472709 on Build GRCh38 | Gain | NFATC1 ATP9B LOC107985149 LOC100996274 SALL3 |
esv29012 | Chr.18:78979427 - 78981039 on Build GRCh38 | Loss | SALL3 |
nsv1065902 | Chr.18:78538045 - 80257174 on Build GRCh38 | Gain | NFATC1 ATP9B LOC107985149 PARD6G LOC105376875 PQLC1 LOC284240 HSBP1L1 RBFADN PARD6G-AS1 LOC100996274 CTDP1 ADNP2 RBFA KCNG2 TXNL4A LOC284241 SALL3 |
esv3643277 | Chr.18:78784238 - 78988253 on Build GRCh38 | Loss | SALL3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |