Assay Details
Target Gene Details
Entrez Gene ID: | 26039 |
Gene Name: | SS18L1, nBAF chromatin remodeling complex subunit |
Gene Aliases: |
CREST, LP2261 |
Location: |
Chr.20:62143720-62182510 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SS18L1 | NM_001301778.1 | NP_001288707.1 | ||
NM_198935.2 | NP_945173.1 | |||
NR_125980.1 | ||||
NR_125981.1 | ||||
XM_005260389.3 | XP_005260446.1 | |||
XM_005260391.1 | XP_005260448.1 | |||
XM_017027784.1 | XP_016883273.1 | |||
AB014593.1 | ||||
AK125656.1 | ||||
AK291485.1 | ||||
AK299881.1 | ||||
AK308765.1 | ||||
BX640848.1 | CAE45918.1 | |||
DC375156.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509782 | Chr.20:62125636 - 62180328 on Build GRCh38 | Insertion |
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nsv586481 | Chr.20:62143364 - 62158583 on Build GRCh38 | Gain |
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nsv3440 | Chr.20:62137705 - 62169472 on Build GRCh38 | Insertion |
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More Information
Additional Information:
For this assay, SNP(s) [rs117085473] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
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