Assay Details
Target Gene Details
Entrez Gene ID: | 54498 |
Gene Name: | spermine oxidase |
Gene Aliases: |
C20orf16, PAO, PAO-1, PAO1, PAOH, PAOH1, SMO |
Location: |
Chr.20:4148779-4187747 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SMOX | NM_001270691.1 | NP_001257620.1 | ||
NM_175839.2 | NP_787033.1 | |||
NM_175840.2 | NP_787034.1 | |||
NM_175841.2 | NP_787035.1 | |||
NM_175842.2 | NP_787036.1 | |||
XM_011529261.2 | XP_011527563.1 | |||
AF519179.1 | AAN77119.1 | |||
AK293485.1 | ||||
AY033889.1 | AAK55763.1 | |||
AY033890.1 | AAK55764.1 | |||
AY033891.1 | AAK55765.1 | |||
BC000669.2 | AAH00669.1 | |||
BG480614.1 | ||||
BG679874.1 | ||||
EF032141.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv828673 | Chr.20:3738382 - 4184811 on Build GRCh38 | Gain |
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esv2762057 | Chr.20:4127368 - 4168472 on Build GRCh38 | Loss |
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nsv833900 | Chr.20:4025051 - 4201317 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs76974945] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)