Assay Details
Target Gene Details
Entrez Gene ID: | 6829 |
Gene Name: | SPT5 homolog, DSIF elongation factor subunit |
Gene Aliases: |
SPT5, SPT5H, Tat-CT1 |
Location: |
Chr.19:39445546-39476670 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SUPT5H | NM_001111020.2 | NP_001104490.1 | ||
NM_001130824.1 | NP_001124296.1 | |||
NM_001130825.1 | NP_001124297.1 | |||
NM_001319990.1 | NP_001306919.1 | |||
NM_001319991.1 | NP_001306920.1 | |||
NM_003169.3 | NP_003160.2 | |||
AB000516.1 | BAA24075.1 | |||
AB209257.1 | BAD92494.1 | |||
AF040253.1 | AAD02179.1 | |||
AK295137.1 | ||||
AK296117.1 | ||||
AK302954.1 | ||||
AK303480.1 | ||||
BC024203.2 | AAH24203.1 | |||
BP199253.1 | ||||
DB064517.1 | ||||
DB097498.1 | ||||
U56402.1 | AAC51102.1 | |||
Y12790.1 | CAA73326.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv523856 | Chr.19:39422918 - 39506832 on Build GRCh38 | Loss | RPS16 DLL3 LOC723805 TIMM50 SUPT5H PLEKHG2 |
nsv953573 | Chr.19:39444461 - 39522960 on Build GRCh38 | Deletion | DLL3 SELV TIMM50 SUPT5H |
More Information
Additional Information:
For this assay, SNP(s) [rs112922364] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |