Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Within Intron 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AF211967.1 | 2 | 1115 | ||
AI660119.1 | ||||
AK160386.1 | 16 | 3569 | BAD18729.1 | |
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644783 | Chr.19:54151022 - 54159664 on Build GRCh38 | Gain | CNOT3 LENG1 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | TMC4 NDUFA3 MBOAT7 TFPT CNOT3 LENG1 PRPF31 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | TMC4 OSCAR NDUFA3 TSEN34 MBOAT7 TFPT CNOT3 LENG1 PRPF31 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | ZNF761 CACNG6 ZNF765 ZNF331 RPS9 NDUFA3 LOC105372457 TFPT MIR935 MIR527 MIR518A1 MIR371B PRPF31 MIR1283-2 MIR526A2 MIR519A2 MIR518E MIR516A1 TPM3P9 MIR519D MIR516B2 MIR519A1 PRKCG MIR519B MIR518C LOC284379 LILRA6 MIR520E MIR515-1 MIR526B TSEN34 MIR520A MIR1323 MIR520H NLRP12 MIR522 MIR525 MIR518A2 MIR520B CACNG7 VN1R4 ZNF525 MIR517C MIR521-2 MIR523 ZNF845 FAM90A27P VSTM1 MIR515-2 LILRB2 MIR518F MIR520F MIR517A LILRB5 MIR512-1 CACNG8 OSCAR MIR524 ZNF813 MBOAT7 LILRB3 MIR1283-1 MYADM MIR517B CNOT3 MIR521-1 MIR371A MIR4752 TARM1 TMC4 ZNF665 MIR526A1 MIR372 MIR519C MIR518D LENG1 MIR512-2 VN1R2 MIR520G MIR520C DPRX MIR516A2 MIR518B ZNF818P MIR519E BIRC8 ZNF677 MIR373 MIR498 MIR520D LILRA5 MIR516B1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |