Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | 1 | 784 | ||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
BC016474.1 | AAH16474.1 | |||
BQ439042.1 | ||||
DB076207.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | MBOAT7 CNOT3 TFPT PRPF31 NDUFA3 LENG1 TMC4 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | MBOAT7 CNOT3 TFPT PRPF31 NDUFA3 OSCAR TSEN34 LENG1 TMC4 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | VN1R4 MIR371B MIR371A VSTM1 ZNF813 MIR521-2 ZNF331 FAM90A27P MIR372 LILRA5 MIR1283-2 MIR516A2 MIR520B LILRB3 MIR515-1 MIR518D MIR517A LILRB2 CACNG7 RPS9 LILRA6 MIR512-2 MIR516A1 MIR518B TARM1 MIR520F MIR526B MIR526A1 MIR520E MIR4752 MBOAT7 MIR520C MIR498 MIR518C LOC105372457 MIR519D MIR526A2 ZNF765 MIR525 MIR521-1 NLRP12 MIR518F MIR520A DPRX ZNF818P MIR518A1 PRPF31 MIR373 CACNG8 MIR524 MIR519B MIR520D TPM3P9 MIR519A1 MIR516B2 OSCAR LILRB5 MIR520G MIR520H MIR512-1 MIR518E ZNF665 CACNG6 MIR517B MYADM MIR522 MIR516B1 MIR515-2 BIRC8 MIR527 ZNF677 MIR935 LOC284379 PRKCG NDUFA3 ZNF525 MIR1283-1 MIR523 TSEN34 ZNF761 TMC4 ZNF845 CNOT3 TFPT MIR519E MIR519C MIR518A2 MIR517C VN1R2 MIR519A2 MIR1323 LENG1 |
nsv2545 | Chr.19:54122949 - 54142607 on Build GRCh38 | Insertion | CNOT3 PRPF31 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |