Hs07138116_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13001371 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	RTBDN RNASEH2A TNPO2 BEST2 MAST1 MIR6515 NFIX MIR5684 FBXW9 SYCE2 DHPS MIR6794 WDR83OS RAD23A FARSA JUNB SNORD135 LOC105372280 PRDX2 MIR5695 DAND5 HOOK2 DNASE2 C19orf43 SNORD41 KLF1 ASNA1 CALR GCDH WDR83 GADD45GIP1
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	KLF1 NFIX SYCE2 MIR5695 CALR RAD23A FARSA DAND5 GCDH MIR6515 GADD45GIP1 DNASE2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding