Assay Details
Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
NM_001288792.1 | NP_001275721.1 | |||
NM_001288793.1 | NP_001275722.1 | |||
NM_198481.3 | NP_940883.2 | |||
NR_110142.1 | ||||
XM_011526845.1 | XP_011525147.1 | |||
XM_011526846.1 | XP_011525148.1 | |||
XM_011526847.1 | XP_011525149.1 | |||
XM_011526848.1 | XP_011525150.1 | |||
XM_011526849.1 | XP_011525151.1 | |||
XM_017026666.1 | XP_016882155.1 | |||
AY358542.1 | AAQ88906.1 | |||
BC100943.2 | AAI00944.1 | |||
BQ446114.1 | ||||
DQ479397.1 | ||||
FJ584316.1 | ||||
FJ584317.1 | ||||
FJ584318.1 | ||||
FJ584319.1 | ||||
FJ584320.1 | ||||
FJ882051.1 | ||||
FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion | OSCAR PRPF31 TARM1 VSTM1 TFPT NDUFA3 |
nsv580110 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain | TARM1 CACNG6 VSTM1 CACNG8 MIR935 |
nsv1057516 | Chr.19:53986233 - 54046901 on Build GRCh38 | Gain | CACNG6 VSTM1 CACNG8 |
nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain | CACNG6 CACNG7 VSTM1 CACNG8 MIR935 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | OSCAR ZNF677 MIR526A2 MIR518A2 MYADM MIR518A1 LILRB3 MIR371A MIR1323 ZNF331 TPM3P9 MIR1283-2 MIR525 TSEN34 MIR371B MIR516B2 ZNF525 LENG1 MBOAT7 LILRA5 FAM90A27P ZNF845 MIR518E MIR515-2 ZNF818P MIR526B LOC105372457 LILRA6 TARM1 MIR519D LOC284379 VSTM1 MIR520B MIR1283-1 PRKCG MIR517A MIR517C VN1R2 LILRB5 NDUFA3 MIR516A2 MIR520E MIR516B1 DPRX MIR517B MIR519E CACNG8 ZNF813 MIR519A1 MIR498 CNOT3 ZNF665 MIR516A1 MIR512-1 MIR935 ZNF765 MIR4752 MIR518F CACNG6 CACNG7 MIR518B TFPT MIR520F TMC4 MIR519A2 MIR520G MIR521-2 VN1R4 RPS9 MIR520A MIR512-2 MIR515-1 MIR519B BIRC8 MIR520D LILRB2 PRPF31 MIR527 MIR521-1 MIR518C MIR373 MIR524 MIR520H MIR372 MIR519C ZNF761 MIR522 MIR523 NLRP12 MIR518D MIR520C MIR526A1 |
nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss | OSCAR PRPF31 TARM1 CACNG6 VSTM1 CACNG8 TFPT NDUFA3 MIR935 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |