Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | STKLD1 SARDH WDR5 DBH-AS1 SNORD141A MIR548AW OBP2B FCN2 FCN1 ADAMTSL2 MIR3689D1 SURF2 MIR3689D2 SNORD24 MIR3689B FAM163B SNORD36A LOC100996574 TSC1 COL5A1 RPL7A OLFM1 MED22 SNORD36C SURF4 LOC101448202 CACFD1 C9orf116 CEL RNU6ATAC CELP MIR3689E TMEM8C VAV2 MRPS2 LOC105376306 PPP1R26 MIR3689C LOC401557 LOC101928193 LOC100130548 REXO4 SURF1 PPP1R26-AS1 GFI1B SLC2A6 SNORD36B MIR4669 LINC00094 SURF6 MIR3689A GTF3C5 SPACA9 LOC101928525 AK8 MIR3689F BRD3 MIR6877 RXRA DBH LCN1 RALGDS ADAMTS13 COL5A1-AS1 ABO C9orf62 GBGT1 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | CEL GTF3C5 LOC105376306 MIR6877 LOC100996574 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | CEL GTF3C5 LOC105376306 RALGDS SNORD141A MIR6877 CELP LOC100996574 GBGT1 GFI1B |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | CEL GTF3C5 LOC105376306 SNORD141A MIR6877 LOC100996574 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |