Assay Details
Target Gene Details
Entrez Gene ID: | 8328 |
Gene Name: | growth factor independent 1B transcriptional repressor |
Gene Aliases: |
BDPLT17, ZNF163B |
Location: |
Chr.9:132945545-132991697 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GFI1B | NM_004188.6 | NP_004179.3 | ||
XM_011519068.2 | XP_011517370.1 | |||
XM_011519070.2 | XP_011517372.1 | |||
XM_017015175.1 | XP_016870664.1 | |||
XM_017015176.1 | XP_016870665.1 | |||
BC043371.1 | AAH43371.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831743 | Chr.9:132820292 - 132982548 on Build GRCh38 | Loss | GFI1B AK8 SPACA9 MIR548AW TSC1 |
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | REXO4 RXRA SARDH LOC101448202 MIR3689D2 SNORD24 LINC00094 CEL MIR6877 PPP1R26-AS1 BRD3 SURF4 MIR4669 TSC1 STKLD1 SURF6 LOC100130548 LOC100996574 SNORD36B DBH OLFM1 MIR3689B WDR5 RALGDS GFI1B SPACA9 COL5A1 LOC101928525 LCN1 VAV2 SNORD141A DBH-AS1 COL5A1-AS1 SNORD36A SLC2A6 MED22 MIR3689E SNORD36C CELP FAM163B SURF1 FCN2 RPL7A C9orf116 PPP1R26 SURF2 ABO MIR3689C GTF3C5 MIR3689A TMEM8C CACFD1 GBGT1 RNU6ATAC MIR3689F MIR548AW LOC105376306 ADAMTS13 MRPS2 OBP2B C9orf62 ADAMTSL2 FCN1 MIR3689D1 AK8 LOC401557 LOC101928193 |
More Information
Additional Information:
For this assay, SNP(s) [rs77630707] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |