Assay Details
Target Gene Details
Entrez Gene ID: | 8328 |
Gene Name: | growth factor independent 1B transcriptional repressor |
Gene Aliases: |
BDPLT17, ZNF163B |
Location: |
Chr.9:132945545-132991697 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GFI1B | NM_004188.6 | NP_004179.3 | ||
BC043371.1 | AAH43371.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831743 | Chr.9:132820292 - 132982548 on Build GRCh38 | Loss | AK8 GFI1B SPACA9 MIR548AW TSC1 |
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | DBH-AS1 PPP1R26-AS1 REXO4 RPL7A SNORD24 SNORD36A SNORD141A MIR3689C TSC1 MIR6877 MIR3689F MIR3689B DBH SLC2A6 TMEM8C LOC401557 MIR548AW MED22 ADAMTS13 SARDH MIR3689D2 MIR3689E SURF6 STKLD1 SURF4 MRPS2 ABO CELP GBGT1 MIR4669 FAM163B AK8 FCN1 ADAMTSL2 LOC105376306 COL5A1 RNU6ATAC SNORD36B OBP2B LOC101928193 LOC100996574 RALGDS MIR3689A PPP1R26 SURF2 SPACA9 SURF1 LOC101448202 C9orf116 BRD3 LCN1 SNORD36C C9orf62 FCN2 OLFM1 RXRA MIR3689D1 VAV2 GFI1B LOC101928525 LOC100130548 WDR5 COL5A1-AS1 CACFD1 CEL LINC00094 GTF3C5 |
More Information
Additional Information:
For this assay, SNP(s) [rs78129172] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |