Assay Details
Target Gene Details
Entrez Gene ID: | 9797 |
Gene Name: | TatD DNase domain containing 2 |
Gene Aliases: |
- |
Location: |
Chr.3:10248493-10281222 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TATDN2 | NM_014760.3 | NP_055575.3 | ||
AK289794.1 | ||||
BC090935.1 | AAH90935.1 | |||
BC101770.1 | AAI01771.1 | |||
BC101776.1 | AAI01777.1 | |||
D86972.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv436362 | Chr.3:10048344 - 11860564 on Build GRCh38 | Deletion | SEC13 IRAK2 FANCD2 SLC6A11 FANCD2OS HRH1 LINC00852 GHRLOS LOC101927467 MIR885 TATDN2 SLC6A1-AS1 BRK1 LINC00606 MIR378B GHRL ATG7 VHL TAMM41 ATP2B2 ATP2B2-IT2 VGLL4 SLC6A1 |
dgv762e201 | Chr.3:10008967 - 11913136 on Build GRCh38 | Deletion | SEC13 IRAK2 FANCD2 SLC6A11 FANCD2OS LINC00852 FANCD2P2 GHRLOS LOC101927467 MIR885 CIDECP LOC401052 EMC3 BRK1 MIR378B GHRL VHL VGLL4 HRH1 TATDN2 SLC6A1-AS1 LINC00606 ATG7 TAMM41 ATP2B2 ATP2B2-IT2 SLC6A1 |
nsv1121603 | Chr.3:10071433 - 11889279 on Build GRCh38 | Deletion | SEC13 IRAK2 FANCD2 SLC6A11 FANCD2OS HRH1 LINC00852 FANCD2P2 GHRLOS LOC101927467 MIR885 TATDN2 SLC6A1-AS1 BRK1 LINC00606 MIR378B GHRL ATG7 VHL TAMM41 ATP2B2 ATP2B2-IT2 VGLL4 SLC6A1 |
nsv436869 | Chr.3:10064456 - 11877985 on Build GRCh38 | Insertion | SEC13 IRAK2 FANCD2 SLC6A11 FANCD2OS HRH1 LINC00852 FANCD2P2 GHRLOS LOC101927467 MIR885 TATDN2 SLC6A1-AS1 BRK1 LINC00606 MIR378B GHRL ATG7 VHL TAMM41 ATP2B2 ATP2B2-IT2 VGLL4 SLC6A1 |
nsv1073204 | Chr.3:9996548 - 11875005 on Build GRCh38 | Deletion | SEC13 IRAK2 FANCD2 SLC6A11 FANCD2OS LINC00852 FANCD2P2 GHRLOS LOC101927467 MIR885 CIDECP LOC401052 EMC3 BRK1 MIR378B GHRL VHL VGLL4 EMC3-AS1 HRH1 TATDN2 SLC6A1-AS1 LINC00606 ATG7 TAMM41 ATP2B2 ATP2B2-IT2 SLC6A1 |
More Information
Additional Information:
For this assay, SNP(s) [rs113207620] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |