Assay Details
Target Gene Details
Entrez Gene ID: | 63976 |
Gene Name: | PR domain 16 |
Gene Aliases: |
CMD1LL, LVNC8, MEL1, PFM13 |
Location: |
Chr.1:3069025-3438621 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRDM16 | NM_022114.3 | NP_071397.3 | ||
NM_199454.2 | NP_955533.2 | |||
XM_005244772.4 | XP_005244829.1 | |||
XM_005244773.4 | XP_005244830.1 | |||
XM_005244774.4 | XP_005244831.1 | |||
XM_006710814.3 | XP_006710877.1 | |||
XM_017002050.1 | XP_016857539.1 | |||
AB051462.2 | ||||
AB078876.1 | BAB84297.1 | |||
AF294278.1 | AAG33382.1 | |||
BC161614.1 | ||||
BQ897896.1 | ||||
BX092842.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3585036 | Chr.1:3004067 - 3089193 on Build GRCh38 | Gain | PRDM16 LINC00982 ACTRT2 |
nsv829759 | Chr.1:3006585 - 3094573 on Build GRCh38 | Loss | PRDM16 LINC00982 ACTRT2 |
nsv824697 | Chr.1:3059293 - 3078148 on Build GRCh38 | Gain | PRDM16 LINC00982 |
nsv951959 | Chr.1:3051037 - 3812036 on Build GRCh38 | Deletion | PRDM16 TP73-AS1 WRAP73 LINC00982 LOC105378604 MIR4251 CCDC27 TPRG1L SMIM1 LRRC47 MEGF6 MIR551A ARHGEF16 TP73 |
nsv545098 | Chr.1:3009815 - 3089567 on Build GRCh38 | Loss | PRDM16 LINC00982 ACTRT2 |
nsv1013792 | Chr.1:3005296 - 3391724 on Build GRCh38 | Gain | PRDM16 LINC00982 LOC105378604 MIR4251 ACTRT2 |
nsv1000306 | Chr.1:3031140 - 3164376 on Build GRCh38 | Gain | PRDM16 LINC00982 MIR4251 |
esv3583359 | Chr.1:2777970 - 3286320 on Build GRCh38 | Gain | PRDM16 TTC34 LINC00982 MIR4251 ACTRT2 |
nsv1076898 | Chr.1:3069235 - 3070836 on Build GRCh38 | Deletion | PRDM16 |
nsv1121743 | Chr.1:3069336 - 3069836 on Build GRCh38 | Deletion | PRDM16 |
dgv11n100 | Chr.1:2777886 - 3350773 on Build GRCh38 | Gain | PRDM16 TTC34 LINC00982 LOC105378604 MIR4251 ACTRT2 |
nsv428399 | Chr.1:2622539 - 3235926 on Build GRCh38 | Gain | PRDM16 TTC34 LINC00982 MIR4251 ACTRT2 MMEL1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |