Assay Details
Target Gene Details
Entrez Gene ID: | 101927839 |
Gene Name: | uncharacterized LOC101927839 |
Gene Aliases: |
- |
Location: |
Chr.17:2232678-2233610 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC101927839 | NR_110888.1 | 2 | 303 | |
BE044566.1 | 1 | 422 | ||
BI461260.1 | 2 | 310 |
Target Gene Details
Entrez Gene ID: | 23293 |
Gene Name: | SMG6, nonsense mediated mRNA decay factor |
Gene Aliases: |
C17orf31, EST1A, SMG-6, hSMG5/7a |
Location: |
Chr.17:2059839-2303836 on Build GRCh38 |
Assay Gene Location: | Within Intron 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SMG6 | NM_001256827.1 | NP_001243756.1 | ||
NM_001256828.1 | NP_001243757.1 | |||
NM_017575.4 | NP_060045.4 | |||
XM_005256569.3 | XP_005256626.1 | |||
XM_005256571.4 | XP_005256628.1 | |||
XM_011523769.2 | XP_011522071.1 | |||
XM_011523772.2 | XP_011522074.1 | |||
XM_011523775.2 | XP_011522077.1 | |||
XM_017024399.1 | XP_016879888.1 | |||
AB018275.2 | ||||
AK024131.1 | BAB14835.1 | |||
AK074270.1 | ||||
AK302964.1 | ||||
AY145883.1 | AAN46114.1 | |||
AY168921.1 | AAO17581.1 | |||
BC064916.1 | AAH64916.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469765 | Chr.17:2213155 - 2400446 on Build GRCh38 | Loss |
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nsv833336 | Chr.17:2176922 - 2400456 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)