Assay Details
Target Gene Details
Entrez Gene ID: | 55872 |
Gene Name: | PDZ binding kinase |
Gene Aliases: |
CT84, HEL164, Nori-3, SPK, TOPK |
Location: |
Chr.8:27809621-27838095 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PBK | NM_001278945.1 | NP_001265874.1 | ||
NM_018492.3 | NP_060962.2 | |||
XM_006716368.2 | XP_006716431.1 | |||
AB027249.1 | BAA99576.1 | |||
AB027250.1 | BAA99577.1 | |||
AF189722.1 | AAF69107.1 | |||
AF237709.1 | AAF71521.1 | |||
AK027291.1 | BAB55019.1 | |||
AK301836.1 | ||||
BC015191.1 | AAH15191.1 | |||
EU794685.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv524133 | Chr.8:27776547 - 27858791 on Build GRCh38 | Loss |
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nsv1030500 | Chr.8:27806175 - 27821659 on Build GRCh38 | Loss |
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dgv7153n100 | Chr.8:27780880 - 27831551 on Build GRCh38 | Loss |
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nsv519636 | Chr.8:27778100 - 27831788 on Build GRCh38 | Gain |
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nsv1017032 | Chr.8:27767011 - 27821659 on Build GRCh38 | Loss |
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dgv7154n100 | Chr.8:27806404 - 27831551 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs73570374] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)