Assay Details
Target Gene Details
Entrez Gene ID: | 6386 |
Gene Name: | syndecan binding protein |
Gene Aliases: |
MDA-9, MDA9, ST1, SYCL, TACIP18 |
Location: |
Chr.8:58553169-58582860 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SDCBP | NM_001007067.1 | NP_001007068.1 | ||
NM_001007068.1 | NP_001007069.1 | |||
NM_001007069.1 | NP_001007070.1 | |||
NM_001007070.1 | NP_001007071.1 | |||
NM_005625.3 | NP_005616.2 | |||
XM_011517571.2 | XP_011515873.2 | |||
XM_017013727.1 | XP_016869216.1 | |||
XM_017013728.1 | XP_016869217.1 | |||
AF000652.1 | AAB97144.1 | |||
AF006636.1 | AAC52050.1 | |||
AK128645.1 | ||||
AK295198.1 | ||||
AK298697.1 | ||||
AK300647.1 | ||||
AK312274.1 | ||||
BC113674.1 | ||||
BC113676.1 | ||||
BC143915.1 | ||||
BC143916.1 | ||||
BG772269.1 | ||||
U83463.1 | AAB51246.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3617340 | Chr.8:58566392 - 58621651 on Build GRCh38 | Gain | SDCBP NSMAF |
nsv1031537 | Chr.8:58570390 - 58624412 on Build GRCh38 | Gain | SDCBP NSMAF |
More Information
Additional Information:
For this assay, SNP(s) [rs113031047] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |