Assay Details
Target Gene Details
Entrez Gene ID: | 10533 |
Gene Name: | autophagy related 7 |
Gene Aliases: |
APG7-LIKE, APG7L, GSA7 |
Location: |
Chr.3:11272324-11564704 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv436362 | Chr.3:10048344 - 11860564 on Build GRCh38 | Deletion | SLC6A1-AS1 FANCD2 ATG7 TAMM41 IRAK2 SLC6A1 SEC13 LOC101927467 BRK1 LINC00852 HRH1 LINC00606 VGLL4 TATDN2 VHL GHRL SLC6A11 ATP2B2-IT2 GHRLOS FANCD2OS MIR378B MIR885 ATP2B2 |
dgv762e201 | Chr.3:10008967 - 11913136 on Build GRCh38 | Deletion | SLC6A1-AS1 FANCD2 CIDECP ATG7 IRAK2 SEC13 LOC101927467 EMC3 HRH1 VGLL4 TATDN2 GHRL GHRLOS MIR885 ATP2B2 TAMM41 FANCD2P2 SLC6A1 BRK1 LINC00852 LINC00606 LOC401052 VHL SLC6A11 ATP2B2-IT2 FANCD2OS MIR378B |
nsv1121603 | Chr.3:10071433 - 11889279 on Build GRCh38 | Deletion | SLC6A1-AS1 FANCD2 ATG7 TAMM41 IRAK2 FANCD2P2 SLC6A1 SEC13 LOC101927467 BRK1 LINC00852 HRH1 LINC00606 VGLL4 TATDN2 VHL GHRL SLC6A11 ATP2B2-IT2 GHRLOS FANCD2OS MIR378B MIR885 ATP2B2 |
nsv436869 | Chr.3:10064456 - 11877985 on Build GRCh38 | Insertion | SLC6A1-AS1 FANCD2 ATG7 TAMM41 IRAK2 FANCD2P2 SLC6A1 SEC13 LOC101927467 BRK1 LINC00852 HRH1 LINC00606 VGLL4 TATDN2 VHL GHRL SLC6A11 ATP2B2-IT2 GHRLOS FANCD2OS MIR378B MIR885 ATP2B2 |
nsv1073204 | Chr.3:9996548 - 11875005 on Build GRCh38 | Deletion | SLC6A1-AS1 FANCD2 CIDECP ATG7 IRAK2 SEC13 LOC101927467 EMC3 HRH1 VGLL4 TATDN2 GHRL GHRLOS MIR885 ATP2B2 EMC3-AS1 TAMM41 FANCD2P2 SLC6A1 BRK1 LINC00852 LINC00606 LOC401052 VHL SLC6A11 ATP2B2-IT2 FANCD2OS MIR378B |
More Information
Additional Information:
For this assay, SNP(s) [rs113339927] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |