Assay Details
Target Gene Details
Entrez Gene ID: | 116987 |
Gene Name: | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 |
Gene Aliases: |
AGAP-1, CENTG2, GGAP1, cnt-g2 |
Location: |
Chr.2:235494089-236131800 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGAP1 | NM_001037131.2 | NP_001032208.1 | ||
NM_001244888.1 | NP_001231817.1 | |||
NM_014914.4 | NP_055729.2 | |||
XM_005246059.4 | XP_005246116.1 | |||
XM_006712234.3 | XP_006712297.1 | |||
XM_006712235.3 | XP_006712298.1 | |||
AB029022.1 | ||||
AF413078.1 | AAL04172.1 | |||
AY033765.1 | AAK56506.1 | |||
BC060814.1 | AAH60814.1 | |||
BC140856.1 | ||||
BC167153.1 | ||||
BC167157.1 | ||||
KJ534764.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527654 | Chr.2:234661964 - 235549244 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() |
nsv834575 | Chr.2:235384329 - 235543362 on Build GRCh38 | Gain |
![]() ![]() |
esv3575341 | Chr.2:235300440 - 235588493 on Build GRCh38 | Gain |
![]() ![]() |
dgv4191n100 | Chr.2:235085672 - 235523486 on Build GRCh38 | Gain |
![]() ![]() |
nsv999839 | Chr.2:234676935 - 235726730 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() |
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs74521096] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
![]() ![]() ![]() ![]() |
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)