Hs05731206_cn

• Gene Symbol: CHD5
• Assay Reference Genome Location: Chr.1:6109171 on build GRCh38
• Cytoband: 1p36.31

Target Gene Details

• Entrez Gene ID: 26038
• Gene Name: chromodomain helicase DNA binding protein 5
• Gene Aliases: CHD-5
• Location: Chr.1:6101787-6180134 on Build GRCh38
• Assay Gene Location: Within Intron 38

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHD5	NM_015557.2			NP_056372.1
	AB007913.1			BAA32289.1
	AF425231.1			AAL98962.1
	AK091386.1
	AK126012.1			BAC86391.1
	AK127046.1			BAC86802.1
	AL110281.1			CAH56404.1
	AL117491.1			CAB55959.1
	AL137693.1			CAH56377.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv21998	Chr.1:6106658 - 6109243 on Build GRCh38	Gain	CHD5
nsv470689	Chr.1:6089062 - 6173513 on Build GRCh38	Loss	CHD5 KCNAB2
nsv461283	Chr.1:6048317 - 6124032 on Build GRCh38	Loss	CHD5 KCNAB2
dgv75n54	Chr.1:6081265 - 6144206 on Build GRCh38	Loss	CHD5 KCNAB2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
negative regulation of cell proliferation
cerebral cortex neuron differentiation
spermatogenesis, exchange of chromosomal proteins
histone H4 acetylation
regulation of transcription involved in cell fate commitment
histone H3-K27 trimethylation
positive regulation of signal transduction by p53 class mediator

Function(s)

DNA binding
ATP binding
ATP-dependent helicase activity
zinc ion binding
H3K27me3 modified histone binding