Hs05652287_cn

• Gene Symbol: ATRX
• Assay Reference Genome Location: Chr.X:77746508 on build GRCh38
• Cytoband: Xq21.1

Target Gene Details

• Entrez Gene ID: 546
• Gene Name: ATRX, chromatin remodeler
• Gene Aliases: ATR2, JMS, MRX52, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX
• Location: Chr.X:77504878-77786269 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATRX	NM_000489.4			NP_000480.3
	NM_138270.3			NP_612114.2
	XM_005262153.4			XP_005262210.2
	XM_005262154.4			XP_005262211.2
	XM_005262155.4			XP_005262212.2
	XM_005262156.4			XP_005262213.2
	XM_005262157.4			XP_005262214.2
	XM_006724666.3			XP_006724729.1
	XM_006724667.3			XP_006724730.1
	XM_006724668.2			XP_006724731.1
	XM_017029601.1			XP_016885090.1
	XM_017029602.1			XP_016885091.1
	XM_017029603.1			XP_016885092.1
	XM_017029604.1			XP_016885093.1
	XM_017029605.1			XP_016885094.1
	XM_017029606.1			XP_016885095.1
	XM_017029607.1			XP_016885096.1
	XM_017029608.1			XP_016885097.1
	XM_017029609.1			XP_016885098.1
	XM_017029610.1			XP_016885099.1
	XM_017029611.1			XP_016885100.1
	AB102641.1			BAC81110.1
	AB208928.1			BAD92165.1
	AK307791.1
	AK308419.1
	BC002521.2			AAH02521.1
	DA759777.1
	DA791316.1
	U72936.2			AAB49969.1
	U72937.2			AAB49970.2
	U72938.2			AAB49971.2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, non-DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

DNA repair
DNA methylation
DNA recombination
nucleosome assembly
DNA replication-independent nucleosome assembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
spermatogenesis
positive regulation of nuclear cell cycle DNA replication
covalent chromatin modification
DNA damage response, signal transduction by p53 class mediator
forebrain development
replication fork processing
positive regulation of telomere maintenance
DNA duplex unwinding
post-embryonic forelimb morphogenesis
multicellular organism growth
positive regulation of transcription from RNA polymerase II promoter
Sertoli cell development
protein localization to chromosome, telomeric region
seminiferous tubule development
cellular response to hydroxyurea
regulation of histone H3-K9 trimethylation
negative regulation of telomeric RNA transcription from RNA pol II promoter
positive regulation of telomeric RNA transcription from RNA pol II promoter
negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric

Function(s)

DNA binding
DNA helicase activity
chromatin binding
helicase activity
protein binding
ATP binding
DNA translocase activity
methylated histone binding
histone binding
metal ion binding
chromo shadow domain binding