Hs05586756_cn

• Gene Symbol: SLC25A18
• Assay Reference Genome Location: Chr.22:17567539 on build GRCh38
• Cytoband: 22q11.21

Target Gene Details

• Entrez Gene ID: 83733
• Gene Name: solute carrier family 25 member 18
• Gene Aliases: GC2
• Location: Chr.22:17562470-17590890 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC25A18	NM_001303484.1			NP_001290413.1
	NM_031481.2			NP_113669.1
	XM_011546149.2			XP_011544451.1
	XM_011546150.2			XP_011544452.1
	XM_011546153.2			XP_011544455.1
	XM_017028969.1			XP_016884458.1
	XM_017028970.1			XP_016884459.1
	XM_017028971.1			XP_016884460.1
	XM_017028972.1			XP_016884461.1
	XM_017028973.1			XP_016884462.1
	XM_017028974.1			XP_016884463.1
	XM_017028975.1			XP_016884464.1
	AJ428203.1			CAD21008.1
	AK095706.1
	AK308974.1
	AK309110.1
	AY008285.1			AAG22855.1
	BC031644.1			AAH31644.1
	DA354203.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9871	Chr.22:17545048 - 17683541 on Build GRCh38	Loss	SLC25A18 BCL2L13 LOC101929372 CECR2 ATP6V1E1
nsv1065055	Chr.22:17559085 - 17632626 on Build GRCh38	Gain	SLC25A18 BCL2L13 LOC101929372 ATP6V1E1
nsv526826	Chr.22:17411511 - 17836413 on Build GRCh38	Gain	MIR3198-1 LINC00528 BID SLC25A18 BCL2L13 LOC101929372 CECR2 ATP6V1E1 MICAL3
nsv3553	Chr.22:17553601 - 17608096 on Build GRCh38	Deletion	SLC25A18 LOC101929372 CECR2 ATP6V1E1
nsv510802	Chr.22:17550100 - 17604891 on Build GRCh38	Deletion	SLC25A18 LOC101929372 CECR2 ATP6V1E1
nsv428385	Chr.22:17491941 - 18886703 on Build GRCh38	Gain+Loss	LINC00528 BID BCL2L13 CECR2 PI4KAP1 MIR648 LOC100996401 TUBA8 MIR3198-1 LOC101929372 FLJ41941 MICAL3 LOC100996432 GGT3P SLC25A18 PEX26 LOC729461 TMEM191B LOC642643 USP18 FAM230A LOC100996415 RIMBP3 ATP6V1E1 LOC102725072

More Information

Additional Information:

For this assay, SNP(s) [rs79335431] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter, secondary carrier transporter

Gene Ontology Categories:

Process(es)

translation
transmembrane transport

Function(s)

structural constituent of ribosome
protein binding
symporter activity