Assay Details
Target Gene Details
Entrez Gene ID: | 9487 |
Gene Name: | phosphatidylinositol glycan anchor biosynthesis class L |
Gene Aliases: |
CHIME |
Location: |
Chr.17:16217195-16351800 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIGL | NM_004278.3 | NP_004269.1 | ||
XM_011524080.2 | XP_011522382.1 | |||
XM_017025349.1 | XP_016880838.1 | |||
XM_017025350.1 | XP_016880839.1 | |||
XM_017025351.1 | XP_016880840.1 | |||
XM_017025352.1 | XP_016880841.1 | |||
XM_017025353.1 | XP_016880842.1 | |||
XM_017025354.1 | XP_016880843.1 | |||
XM_017025355.1 | XP_016880844.1 | |||
XM_017025356.1 | XP_016880845.1 | |||
AB017165.1 | BAA74775.1 | |||
AK292932.1 | ||||
AK296120.1 | ||||
AK302523.1 | ||||
BC068197.1 | AAH68197.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528263 | Chr.17:16194116 - 16293682 on Build GRCh38 | Loss | PIGL NCOR1 MIR1288 |
nsv522169 | Chr.17:16020395 - 16244507 on Build GRCh38 | Gain | PIGL NCOR1 TTC19 |
esv2715702 | Chr.17:15750514 - 16668268 on Build GRCh38 | Deletion | SNORD65 CENPV PIGL NCOR1 LRRC75A MIR1288 MEIS3P1 ZNF287 ZSWIM7 ADORA2B CCDC144A ZNF624 TRPV2 SNORD49B CDRT15P2 LRRC75A-AS1 TTC19 SNORD49A UBB LOC101928567 |
More Information
Additional Information:
For this assay, SNP(s) [rs75293780] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |