Assay Details
Target Gene Details
Entrez Gene ID: | 100130950 |
Gene Name: | uncharacterized LOC100130950 |
Gene Aliases: |
- |
Location: |
Chr.17:5192084-5235636 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100130950 | NR_034082.1 | |||
AK021878.1 |
Target Gene Details
Entrez Gene ID: | 388325 |
Gene Name: | SLP adaptor and CSK interacting membrane protein |
Gene Aliases: |
C17orf87, UNQ5783 |
Location: |
Chr.17:5208920-5234860 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCIMP | NM_001271842.1 | NP_001258771.1 | ||
NM_001319190.1 | NP_001306119.1 | |||
NM_207103.3 | NP_996986.1 | |||
XM_017024615.1 | XP_016880104.1 | |||
AK057142.1 | ||||
AK297035.1 | ||||
AK310145.1 | ||||
AY358809.1 | AAQ89169.1 | |||
BC127925.1 | ||||
BC130554.1 | ||||
BC130556.1 | ||||
BC144395.1 | ||||
DQ778084.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | GLTPD2 ZNF594 PELP1 C1QBP CAMTA2 PFN1 PLD2 GP1BA LOC101559451 ZFP3 CXCL16 MED11 LOC400568 ZMYND15 SCIMP RABEP1 LOC100130950 MINK1 RNF167 ZNF232 ALOX15 SMTNL2 TM4SF5 DHX33 MIR6865 C17orf107 LOC107984973 VMO1 SLC52A1 ENO3 LOC101927979 MIR6864 SPAG7 SLC25A11 LOC102724009 NUP88 CHRNE PSMB6 ARRB2 INCA1 USP6 RPAIN KIF1C LOC101928000 |
dgv3089n100 | Chr.17:5187013 - 5327634 on Build GRCh38 | Gain | SCIMP RABEP1 LOC100130950 ZNF594 |
More Information
Additional Information:
For this assay, SNP(s) [rs79577751] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |