Assay Details
Target Gene Details
Entrez Gene ID: | 7023 |
Gene Name: | transcription factor AP-4 (activating enhancer binding protein 4) |
Gene Aliases: |
AP-4, bHLHc41 |
Location: |
Chr.16:4257186-4273000 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TFAP4 | NM_003223.2 | NP_003214.1 | ||
XM_011522633.2 | XP_011520935.1 | |||
XM_011522635.2 | XP_011520937.1 | |||
AB209146.1 | 1 | 2039 | BAD92383.1 | |
AK309301.1 | ||||
BC010576.1 | AAH10576.1 | |||
BU159415.1 | ||||
CR541726.1 | CAG46527.1 | |||
DA449763.1 | ||||
S73885.1 | AAB32235.1 | |||
X57435.1 | CAA40683.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | NMRAL1 SEPT12 SMIM22 DNAJA3 HMOX2 C16orf89 GLYR1 ZNF500 TFAP4 VASN MIR6769A GLIS2 PAM16 MGRN1 PPL SRL UBALD1 NAGPA-AS1 ALG1 SEC14L5 EEF2KMT ANKS3 LOC105371063 CORO7 UBN1 GLIS2-AS1 NUDT16L1 CDIP1 CORO7-PAM16 LINC01569 C16orf96 ROGDI RBFOX1 C16orf71 NAGPA ADCY9 |
esv21490 | Chr.16:3825338 - 4270692 on Build GRCh38 | Gain+Loss | LOC105371063 LINC01569 CREBBP LOC102724927 TFAP4 SRL ADCY9 |
nsv527866 | Chr.16:4206462 - 4412618 on Build GRCh38 | Loss | LOC105371063 LINC01569 GLIS2 CORO7 PAM16 GLIS2-AS1 TFAP4 VASN SRL CORO7-PAM16 |
More Information
Additional Information:
For this assay, SNP(s) [rs115769827] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |