Assay Details
Target Gene Details
Entrez Gene ID: | 79585 |
Gene Name: | coronin 7 |
Gene Aliases: |
0610011B16Rik, CRN7, POD1 |
Location: |
Chr.16:4354542-4416961 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CORO7 | NM_001201472.1 | NP_001188401.1 | ||
NM_001201473.1 | NP_001188402.1 | |||
NM_024535.4 | NP_078811.3 | |||
AK025674.1 | BAB15211.1 | |||
AK094596.1 | ||||
AK097238.1 | ||||
AK294045.1 | ||||
AK296723.1 | ||||
AK296807.1 | ||||
AK303353.1 | ||||
AK309327.1 | ||||
AK309763.1 | ||||
BC117289.1 | ||||
BC117291.1 |
Target Gene Details
Entrez Gene ID: | 100529144 |
Gene Name: | CORO7-PAM16 readthrough |
Gene Aliases: |
- |
Location: |
Chr.16:4340251-4416961 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CORO7-PAM16 | NM_001201479.1 | NP_001188408.1 | ||
AL833954.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471075 | Chr.16:4317729 - 4395326 on Build GRCh38 | Loss | PAM16 GLIS2-AS1 VASN CORO7 CORO7-PAM16 GLIS2 |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | VASN NAGPA TFAP4 CORO7 GLYR1 ADCY9 C16orf71 LINC01569 DNAJA3 GLIS2-AS1 SRL SEPT12 MIR6769A PPL RBFOX1 NAGPA-AS1 UBN1 NUDT16L1 ANKS3 CORO7-PAM16 EEF2KMT GLIS2 NMRAL1 SMIM22 C16orf96 PAM16 SEC14L5 UBALD1 CDIP1 ZNF500 ALG1 MGRN1 C16orf89 LOC105371063 ROGDI HMOX2 |
nsv571274 | Chr.16:4309420 - 4441189 on Build GRCh38 | Gain | PAM16 DNAJA3 GLIS2-AS1 VASN CORO7 CORO7-PAM16 GLIS2 |
nsv527866 | Chr.16:4206462 - 4412618 on Build GRCh38 | Loss | PAM16 GLIS2-AS1 VASN TFAP4 SRL CORO7 CORO7-PAM16 LOC105371063 GLIS2 LINC01569 |
esv3584924 | Chr.16:4330628 - 4469258 on Build GRCh38 | Gain | PAM16 DNAJA3 VASN CORO7 CORO7-PAM16 GLIS2 NMRAL1 |
nsv520212 | Chr.16:4354619 - 4390827 on Build GRCh38 | Loss | VASN CORO7 CORO7-PAM16 |
esv23732 | Chr.16:4340813 - 4476244 on Build GRCh38 | Gain | PAM16 DNAJA3 VASN CORO7 CORO7-PAM16 NMRAL1 HMOX2 |
More Information
Additional Information:
For this assay, SNP(s) [rs139550185] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |