Assay Details
Target Gene Details
Entrez Gene ID: | 1013 |
Gene Name: | cadherin 15 |
Gene Aliases: |
CDH14, CDH3, CDHM, MCAD, MRD3 |
Location: |
Chr.16:89171755-89195492 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CDH15 | NM_004933.2 | NP_004924.1 | ||
AK308596.1 | ||||
AK308631.1 | ||||
BC008951.2 | AAH08951.1 | |||
D83542.1 | BAA12012.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509638 | Chr.16:89152681 - 89296203 on Build GRCh38 | Insertion | ACSF3 CDH15 LINC00304 LOC105371414 SLC22A31 ZNF778 LOC400558 ANKRD11 |
nsv952072 | Chr.16:89032193 - 89201992 on Build GRCh38 | Deletion | ACSF3 CDH15 LINC00304 SLC22A31 LOC400558 |
nsv573727 | Chr.16:89169527 - 89193067 on Build GRCh38 | Loss | CDH15 |
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | MIR4722 CBFA2T3 LOC107987238 GALNS PIEZO1 SLC22A31 LOC100129697 APRT LOC100289580 ACSF3 CDH15 LINC00304 TRAPPC2L LOC339059 CDT1 LOC101927793 ZNF778 LOC400558 PABPN1L CTU2 LOC105371409 |
nsv471115 | Chr.16:88801844 - 89197442 on Build GRCh38 | Loss | CBFA2T3 LOC107987238 GALNS SLC22A31 LOC100129697 APRT ACSF3 CDH15 LINC00304 TRAPPC2L CDT1 LOC101927793 LOC400558 PABPN1L LOC105371409 |
nsv573720 | Chr.16:88968841 - 89184474 on Build GRCh38 | Gain | ACSF3 CDH15 LINC00304 CBFA2T3 LOC400558 |
nsv573724 | Chr.16:89100686 - 89217401 on Build GRCh38 | Loss | ACSF3 CDH15 LINC00304 SLC22A31 ZNF778 LOC400558 |
nsv573674 | Chr.16:88738775 - 89325907 on Build GRCh38 | Gain | CBFA2T3 LOC107987238 LOC105371414 GALNS PIEZO1 SLC22A31 LOC100129697 APRT LOC100289580 ACSF3 CDH15 LINC00304 LOC100287036 TRAPPC2L LOC339059 CDT1 LOC101927793 ZNF778 LOC400558 PABPN1L ANKRD11 LOC105371409 |
dgv3066n100 | Chr.16:89067685 - 89301626 on Build GRCh38 | Gain | ACSF3 CDH15 LINC00304 LOC105371414 SLC22A31 ZNF778 LOC400558 ANKRD11 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | MIR4722 CBFA2T3 DBNDD1 SLC22A31 ZNF276 LOC100289580 LINC00304 DPEP1 CDT1 CDK10 LOC107987238 CHMP1A LOC105371414 SPATA33 LOC101927817 DEF8 VPS9D1 CENPBD1 TUBB3 URAHP FAM157C LOC105371419 LOC100287036 LOC339059 LOC105371409 GAS8-AS1 SPG7 LOC107984817 SNORD68 GALNS LOC100129697 TUBB8P7 RNF166 GAS8 TCF25 APRT SNAI3-AS1 SNAI3 CDH15 MVD MC1R SPATA2L SPIRE2 PRDM7 RPL13 LOC101927793 ZNF778 LOC400558 CTU2 ANKRD11 VPS9D1-AS1 IL17C PIEZO1 FANCA ACSF3 TRAPPC2L CYBA CPNE7 AFG3L1P PABPN1L |
dgv5320n54 | Chr.16:89114475 - 89197443 on Build GRCh38 | Loss | ACSF3 CDH15 LINC00304 SLC22A31 LOC400558 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |