Assay Details
Target Gene Details
Entrez Gene ID: | 7023 |
Gene Name: | transcription factor AP-4 (activating enhancer binding protein 4) |
Gene Aliases: |
AP-4, bHLHc41 |
Location: |
Chr.16:4257186-4273000 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TFAP4 | NM_003223.2 | NP_003214.1 | ||
XM_011522633.2 | XP_011520935.1 | |||
XM_011522635.2 | XP_011520937.1 | |||
AB209146.1 | BAD92383.1 | |||
AK309301.1 | ||||
BC010576.1 | AAH10576.1 | |||
BU159415.1 | ||||
CR541726.1 | CAG46527.1 | |||
S73885.1 | AAB32235.1 | |||
X57435.1 | CAA40683.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | C16orf96 NAGPA-AS1 SRL RBFOX1 LOC105371063 C16orf89 GLIS2 C16orf71 NAGPA ANKS3 ROGDI UBN1 TFAP4 MGRN1 SMIM22 DNAJA3 CORO7 NMRAL1 ZNF500 CORO7-PAM16 PAM16 LINC01569 ADCY9 HMOX2 CDIP1 GLIS2-AS1 SEC14L5 EEF2KMT SEPT12 VASN NUDT16L1 MIR6769A UBALD1 PPL ALG1 GLYR1 |
esv21490 | Chr.16:3825338 - 4270692 on Build GRCh38 | Gain+Loss | LINC01569 ADCY9 TFAP4 SRL LOC102724927 CREBBP LOC105371063 |
nsv527866 | Chr.16:4206462 - 4412618 on Build GRCh38 | Loss | CORO7-PAM16 PAM16 LINC01569 TFAP4 GLIS2-AS1 SRL VASN LOC105371063 GLIS2 CORO7 |
More Information
Additional Information:
For this assay, SNP(s) [rs74003266] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |