Assay Details
Target Gene Details
Entrez Gene ID: | 321 |
Gene Name: | amyloid beta precursor protein binding family A member 2 |
Gene Aliases: |
D15S1518E, HsT16821, LIN-10, MGC:14091, MINT2, X11-BETA, X11L |
Location: |
Chr.15:28885479-29118315 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1040778 | Chr.15:28689598 - 30515727 on Build GRCh38 | Loss | CHRFAM7A APBA2 LOC107984752 LOC100130111 GOLGA8T DKFZP434L187 LOC101060569 LOC100289656 TJP1 NSMCE3 LOC105370746 GOLGA8J LOC105370751 FAM189A1 PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA8M GOLGA6L7P GOLGA8R |
nsv527255 | Chr.15:28754022 - 30074044 on Build GRCh38 | Gain | FAM189A1 APBA2 LOC107984752 LOC100130111 PDCD6IPP2 WHAMMP2 GOLGA6L7P LOC100289656 TJP1 NSMCE3 |
nsv475691 | Chr.15:28954969 - 28954969 on Build GRCh38 | Novel Sequence Insertion | APBA2 |
esv2751526 | Chr.15:28724519 - 30687025 on Build GRCh38 | Loss | CHRFAM7A LOC107984752 LOC100288637 LOC100996413 GOLGA8T LOC100289656 GOLGA8H TJP1 GOLGA8J PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA6L7P GOLGA8R ULK4P2 APBA2 LOC100130111 ARHGAP11B DKFZP434L187 LOC101060569 LOC101927579 NSMCE3 LOC105370746 LOC105370751 FAM189A1 |
nsv1039798 | Chr.15:28724126 - 30158154 on Build GRCh38 | Gain | APBA2 LOC107984752 LOC100130111 GOLGA8T LOC100289656 TJP1 NSMCE3 GOLGA8J FAM189A1 PDCD6IPP2 ULK4P3 WHAMMP2 GOLGA6L7P |
nsv516384 | Chr.15:28920744 - 28996217 on Build GRCh38 | Loss | APBA2 |
nsv1038806 | Chr.15:28933682 - 28965543 on Build GRCh38 | Gain | APBA2 |
nsv568662 | Chr.15:27726493 - 29056123 on Build GRCh38 | Gain | APBA2 LOC107984752 MIR4509-2 LOC645202 LOC100289656 LOC100132202 GOLGA8G HERC2P11 PDCD6IPP2 WHAMMP2 MIR4509-3 GOLGA8F GOLGA8M GOLGA6L7P HERC2P9 OCA2 HERC2 LOC101929047 |
More Information
Additional Information:
For this assay, SNP(s) [rs115085960] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |