Assay Details
Target Gene Details
Entrez Gene ID: | 57099 |
Gene Name: | apoptosis and caspase activation inhibitor |
Gene Aliases: |
PDCD12 |
Location: |
Chr.15:33858602-34074877 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AVEN | NM_020371.2 | NP_065104.1 | ||
XM_011521818.2 | XP_011520120.1 | |||
XM_011521819.2 | XP_011520121.1 | |||
XM_011521820.1 | XP_011520122.1 | |||
AF283508.1 | AAF91470.1 | |||
BC010488.1 | AAH10488.1 | |||
BC063533.1 | AAH63533.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471235 | Chr.15:33743328 - 34129750 on Build GRCh38 | Gain | PGBD4 AVEN CHRM5 RYR3 EMC7 |
nsv1052620 | Chr.15:32612402 - 34538731 on Build GRCh38 | Gain | LPCAT4 LOC105370757 LOC100131315 GOLGA8B EMC4 SLC12A6 GREM1 NOP10 LOC101928134 GOLGA8A TMCO5B SCG5 FMN1 PGBD4 KATNBL1 LOC101928042 ARHGAP11A NUTM1 AVEN CHRM5 RYR3 MIR1233-1 EMC7 MIR1233-2 |
esv33337 | Chr.15:31689863 - 34575097 on Build GRCh38 | Gain+Loss | LOC105370757 LOC105370940 LOC100131315 GOLGA8B GREM1 NOP10 LOC101928134 GOLGA8A TMCO5B SCG5 FMN1 GOLGA8O KATNBL1 LOC101928042 NUTM1 GOLGA8K ULK4P1 CHRM5 LOC100653133 RYR3 WHAMMP1 MIR1233-2 LPCAT4 GOLGA8N EMC4 SLC12A6 CHRNA7 LOC101060588 LOC100996255 PGBD4 ARHGAP11A AVEN MIR1233-1 EMC7 |
nsv568921 | Chr.15:33754434 - 33955421 on Build GRCh38 | Gain | AVEN RYR3 |
esv3569431 | Chr.15:33564570 - 35080307 on Build GRCh38 | Gain | LPCAT4 GOLGA8B EMC4 SLC12A6 LOC101928174 ACTC1 NOP10 GOLGA8A PGBD4 KATNBL1 ZNF770 NUTM1 AVEN AQR CHRM5 RYR3 MIR1233-1 EMC7 MIR1233-2 GJD2 |
nsv1044844 | Chr.15:33773323 - 34004628 on Build GRCh38 | Loss | AVEN CHRM5 RYR3 |
nsv568920 | Chr.15:33742220 - 34134417 on Build GRCh38 | Gain | PGBD4 AVEN CHRM5 RYR3 EMC7 |
dgv4456n54 | Chr.15:32604149 - 34557061 on Build GRCh38 | Gain | LOC105370757 LOC100131315 GOLGA8B GREM1 NOP10 LOC101928134 GOLGA8A TMCO5B SCG5 FMN1 KATNBL1 LOC101928042 NUTM1 CHRM5 RYR3 MIR1233-2 LPCAT4 GOLGA8N EMC4 SLC12A6 PGBD4 ARHGAP11A AVEN MIR1233-1 EMC7 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |