Assay Details
Target Gene Details
Entrez Gene ID: | 57099 |
Gene Name: | apoptosis and caspase activation inhibitor |
Gene Aliases: |
PDCD12 |
Location: |
Chr.15:33858602-34074877 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AVEN | NM_020371.2 | NP_065104.1 | ||
XM_011521818.2 | XP_011520120.1 | |||
XM_011521819.2 | XP_011520121.1 | |||
XM_011521820.1 | XP_011520122.1 | |||
AF283508.1 | AAF91470.1 | |||
BC010488.1 | AAH10488.1 | |||
BC063533.1 | AAH63533.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv471235 | Chr.15:33743328 - 34129750 on Build GRCh38 | Gain | PGBD4 CHRM5 EMC7 RYR3 AVEN |
nsv1052620 | Chr.15:32612402 - 34538731 on Build GRCh38 | Gain | PGBD4 CHRM5 LPCAT4 LOC105370757 GREM1 MIR1233-2 LOC100131315 EMC7 NOP10 SLC12A6 ARHGAP11A FMN1 TMCO5B NUTM1 LOC101928134 KATNBL1 LOC101928042 MIR1233-1 GOLGA8A RYR3 SCG5 EMC4 AVEN GOLGA8B |
esv33337 | Chr.15:31689863 - 34575097 on Build GRCh38 | Gain+Loss | PGBD4 LPCAT4 GREM1 LOC100996255 LOC100131315 ARHGAP11A GOLGA8O TMCO5B LOC100653133 LOC101928134 ULK4P1 LOC101928042 WHAMMP1 GOLGA8A SCG5 EMC4 AVEN GOLGA8B CHRNA7 CHRM5 GOLGA8N LOC105370757 LOC101060588 MIR1233-2 EMC7 NOP10 SLC12A6 FMN1 NUTM1 LOC105370940 KATNBL1 MIR1233-1 GOLGA8K RYR3 |
nsv568921 | Chr.15:33754434 - 33955421 on Build GRCh38 | Gain | RYR3 AVEN |
esv3569431 | Chr.15:33564570 - 35080307 on Build GRCh38 | Gain | LOC101928174 PGBD4 CHRM5 LPCAT4 ZNF770 MIR1233-2 EMC7 NOP10 SLC12A6 NUTM1 ACTC1 GJD2 KATNBL1 MIR1233-1 GOLGA8A RYR3 EMC4 AQR AVEN GOLGA8B |
nsv1044844 | Chr.15:33773323 - 34004628 on Build GRCh38 | Loss | CHRM5 RYR3 AVEN |
nsv568920 | Chr.15:33742220 - 34134417 on Build GRCh38 | Gain | PGBD4 CHRM5 EMC7 RYR3 AVEN |
dgv4456n54 | Chr.15:32604149 - 34557061 on Build GRCh38 | Gain | PGBD4 LPCAT4 GREM1 LOC100131315 ARHGAP11A TMCO5B LOC101928134 LOC101928042 GOLGA8A SCG5 EMC4 AVEN GOLGA8B CHRM5 GOLGA8N LOC105370757 MIR1233-2 EMC7 NOP10 SLC12A6 FMN1 NUTM1 KATNBL1 MIR1233-1 RYR3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |