Assay Details
Target Gene Details
Entrez Gene ID: | 10082 |
Gene Name: | glypican 6 |
Gene Aliases: |
OMIMD1 |
Location: |
Chr.13:93226825-94408020 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GPC6 | NM_005708.3 | NP_005699.1 | ||
XM_011521044.2 | XP_011519346.1 | |||
XM_017020298.1 | XP_016875787.1 | |||
XM_017020299.1 | XP_016875788.1 | |||
XM_017020300.1 | XP_016875789.1 | |||
XM_017020301.1 | XP_016875790.1 | |||
AF105267.1 | AAD55749.1 | |||
AF111178.1 | AAD31392.1 | |||
AK074741.1 | ||||
AK290144.1 | ||||
AK304338.1 | ||||
AY358462.1 | AAQ88827.1 | |||
BC106947.2 | AAI06948.1 |
Target Gene Details
Entrez Gene ID: | 100873973 |
Gene Name: | GPC6 antisense RNA 2 |
Gene Aliases: |
- |
Location: |
Chr.13:93818424-93858473 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GPC6-AS2 | NR_046536.1 | |||
BI827445.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3892424 | Chr.13:92937463 - 94196357 on Build GRCh38 | Gain | GPC6 GPC6-AS2 GPC6-AS1 LINC00363 |
nsv832684 | Chr.13:93727254 - 93898600 on Build GRCh38 | Loss | GPC6 GPC6-AS2 |
More Information
Additional Information:
For this assay, SNP(s) [rs73551731] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |