Hs05219677_cn

• Gene Symbol: OPN4
• Assay Reference Genome Location: Chr.10:86657583 on build GRCh38
• Cytoband: 10q23.2

Target Gene Details

• Entrez Gene ID: 94233
• Gene Name: opsin 4
• Gene Aliases: MOP
• Location: Chr.10:86653495-86666460 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OPN4	NM_001030015.2			NP_001025186.1
	NM_033282.3			NP_150598.1
	XM_017016955.1			XP_016872444.1
	XM_017016956.1			XP_016872445.1
	XM_017016957.1			XP_016872446.1
	BC113558.1
	BC143688.1
	CD634966.1
	CD634974.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv551787	Chr.10:86654540 - 86662359 on Build GRCh38	Gain	OPN4
dgv1320n54	Chr.10:86653016 - 86668546 on Build GRCh38	Gain	OPN4 LDB3
dgv1323n54	Chr.10:86655778 - 86658344 on Build GRCh38	Loss	OPN4
nsv1049754	Chr.10:86604960 - 86699322 on Build GRCh38	Gain	OPN4 LDB3
nsv524269	Chr.10:86654455 - 86680809 on Build GRCh38	Loss	OPN4 LDB3
dgv116n27	Chr.10:86653555 - 86682683 on Build GRCh38	Loss	OPN4 LDB3
dgv948n100	Chr.10:86646619 - 86714855 on Build GRCh38	Gain	OPN4 LDB3
nsv551783	Chr.10:86630480 - 86680809 on Build GRCh38	Loss	OPN4 LDB3
dgv1322n54	Chr.10:86654460 - 86662305 on Build GRCh38	Loss	OPN4
nsv470968	Chr.10:86647213 - 86709830 on Build GRCh38	Loss	OPN4 LDB3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

visual perception
phototransduction
rhodopsin mediated signaling pathway
protein-chromophore linkage
regulation of circadian rhythm
rhythmic process
cellular response to light stimulus

Function(s)

11-cis retinal binding
G-protein coupled photoreceptor activity