Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | CEL DBH SNORD141A COL5A1 MRPS2 MED22 SARDH SNORD36A MIR548AW VAV2 GBGT1 SLC2A6 WDR5 GFI1B LCN1 LOC401557 MIR3689E RALGDS MIR3689F OBP2B C9orf62 MIR6877 LOC101448202 MIR3689D1 LOC101928525 SNORD36C SPACA9 AK8 PPP1R26 REXO4 ADAMTSL2 ABO MIR3689C SNORD36B CACFD1 TMEM8C SURF1 MIR3689A LOC100996574 SURF4 COL5A1-AS1 MIR4669 MIR3689D2 FCN1 RNU6ATAC PPP1R26-AS1 LOC100130548 SURF2 C9orf116 FCN2 SNORD24 DBH-AS1 STKLD1 ADAMTS13 FAM163B OLFM1 LOC105376306 TSC1 RPL7A SURF6 RXRA MIR3689B BRD3 LOC101928193 LINC00094 GTF3C5 CELP |
nsv6746 | Chr.9:133044293 - 133068877 on Build GRCh38 | Insertion | CEL MIR6877 LOC100996574 GTF3C5 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | CEL MIR6877 LOC105376306 LOC100996574 GTF3C5 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | CEL MIR6877 GBGT1 SNORD141A GFI1B RALGDS LOC105376306 LOC100996574 GTF3C5 CELP |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | CEL MIR6877 SNORD141A LOC105376306 LOC100996574 GTF3C5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |