Genomic Map
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Target Gene Details
Entrez Gene ID: | 51510 |
Gene Name: | charged multivesicular body protein 5 |
Gene Aliases: |
C9orf83, CGI-34, HSPC177, PNAS-2, SNF7DC2, Vps60 |
Location: |
Chr.9:33264879-33282069 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CHMP5 | NM_001195536.1 | NP_001182465.1 | ||
| NM_016410.5 | NP_057494.3 | |||
| AF132968.1 | AAD27743.1 | |||
| AF161525.1 | AAF29140.1 | |||
| AF229832.1 | AAF42917.1 | |||
| AF275810.1 | AAG23821.1 | |||
| AK024753.1 | ||||
| AK295744.1 | ||||
| AK315455.1 | ||||
| BC006974.1 | AAH06974.1 | |||
| BC007457.1 | AAH07457.1 | |||
| BC016698.1 | AAH16698.1 | |||
| BC020796.1 | AAH20796.1 | |||
| BC021168.1 | AAH21168.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv519369 | Chr.9:33134619 - 33283163 on Build GRCh38 | Gain |
 SPINK4
B4GALT1-AS1
B4GALT1
BAG1
CHMP5
|
| dgv7516n100 | Chr.9:33121909 - 33278846 on Build GRCh38 | Gain |
SPINK4
B4GALT1-AS1
B4GALT1
BAG1
CHMP5
|
| nsv614146 | Chr.9:33186158 - 33398608 on Build GRCh38 | Gain |
SPINK4
BAG1
NFX1
AQP7
CHMP5
|
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Additional Information:
For this assay, SNP(s) [rs117174222] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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