Assay Details
Target Gene Details
Entrez Gene ID: | 8328 |
Gene Name: | growth factor independent 1B transcriptional repressor |
Gene Aliases: |
BDPLT17, ZNF163B |
Location: |
Chr.9:132945545-132991697 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GFI1B | NM_004188.6 | NP_004179.3 | ||
BC043371.1 | AAH43371.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831743 | Chr.9:132820292 - 132982548 on Build GRCh38 | Loss | AK8 MIR548AW SPACA9 TSC1 GFI1B |
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | ADAMTS13 TSC1 GTF3C5 PPP1R26 CELP LCN1 WDR5 FAM163B OBP2B LOC105376306 LOC100130548 SURF2 FCN1 DBH-AS1 SARDH LOC401557 SURF4 GBGT1 SURF1 MRPS2 SNORD36B ADAMTSL2 MIR3689F C9orf116 VAV2 REXO4 MIR548AW CEL MIR4669 MIR6877 MIR3689C RNU6ATAC RXRA COL5A1-AS1 BRD3 SNORD36C SNORD36A SLC2A6 TMEM8C AK8 ABO SPACA9 MIR3689B MIR3689D1 GFI1B RALGDS OLFM1 LOC100996574 CACFD1 LOC101448202 MIR3689E MIR3689D2 FCN2 DBH C9orf62 COL5A1 LINC00094 LOC101928193 SNORD141A PPP1R26-AS1 MED22 STKLD1 SNORD24 RPL7A LOC101928525 MIR3689A SURF6 |
nsv6745 | Chr.9:132929207 - 132958453 on Build GRCh38 | Insertion | MIR548AW TSC1 GFI1B |
More Information
Additional Information:
For this assay, SNP(s) [rs116432980] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |