Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_001301726.1 | NP_001288655.1 | ||
NM_006602.3 | NP_006593.2 | |||
XM_005260185.3 | XP_005260242.1 | |||
XM_011528497.2 | XP_011526799.1 | |||
XM_011528498.2 | XP_011526800.1 | |||
XM_011528499.1 | XP_011526801.1 | |||
AB012124.1 | BAA36557.1 | |||
AF070992.1 | AAD53986.1 | |||
AJ271337.1 | CAC24700.1 | |||
BC046933.1 | AAH46933.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | OGFR-AS1 DPH3P1 OGFR LOC107987285 LINC00659 NTSR1 LOC107985428 MRGBP TCFL5 COL9A3 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | DPH3P1 DIDO1 TCFL5 COL9A3 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | OGFR-AS1 FNDC11 ARFGAP1 LINC00659 GMEB2 MIR3196 NKAIN4 BIRC7 FLJ16779 SRMS GID8 HELZ2 LOC100130587 YTHDF1 LOC107985428 MIR4326 EEF1A2 LINC00029 KCNQ2 MIR124-3 SLC17A9 OGFR LOC63930 COL20A1 BHLHE23 CHRNA4 DIDO1 LOC102723788 DPH3P1 HAR1B PTK6 LOC107985425 PPDPF LOC100130152 MRGBP HAR1A LINC01056 TCFL5 COL9A3 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | OGFR-AS1 OGFR LOC107987285 LINC00659 NTSR1 DIDO1 DPH3P1 SLCO4A1-AS1 SLCO4A1 LOC107985428 MRGBP TCFL5 COL9A3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |