Assay Details
Target Gene Details
Entrez Gene ID: | 102466864 |
Gene Name: | microRNA 6516 |
Gene Aliases: |
hsa-mir-6516 |
Location: |
Chr.17:77089417-77089497 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR6516 | NR_106997.1 |
Target Gene Details
Entrez Gene ID: | 677781 |
Gene Name: | small Cajal body-specific RNA 16 |
Gene Aliases: |
ACA47 |
Location: |
Chr.17:77089307-77089493 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCARNA16 | NR_003013.1 | |||
AJ609486.1 |
Target Gene Details
Entrez Gene ID: | 6397 |
Gene Name: | SEC14 like lipid binding 1 |
Gene Aliases: |
PRELID4A, SEC14L |
Location: |
Chr.17:77088643-77217101 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEC14L1 | NM_001204408.1 | NP_001191337.1 | ||
NM_001204410.1 | NP_001191339.1 | |||
FM995495.1 | ||||
FM995496.1 | ||||
FM995497.1 | ||||
FM995498.1 | ||||
FN357114.1 | ||||
FN357120.1 |
Target Gene Details
Entrez Gene ID: | 654434 |
Gene Name: | small nucleolar RNA host gene 20 |
Gene Aliases: |
C17orf86, LINC00338, NCRNA00338, SCARNA16HG |
Location: |
Chr.17:77088643-77094986 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SNHG20 | NR_027058.1 | |||
AF130050.1 | AAG35478.1 | |||
BX648413.1 | ||||
DA068554.1 | ||||
DA916381.1 | ||||
FN357113.1 | ||||
FN357115.1 | ||||
FN357116.1 | ||||
FN357117.1 | ||||
FN357118.1 | ||||
FN357119.1 | ||||
FN357121.1 | ||||
FN357122.1 | ||||
FN357123.1 | ||||
FN357124.1 | ||||
FN357125.1 | ||||
FN357126.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv5784n54 | Chr.17:77049144 - 77101828 on Build GRCh38 | Gain | MIR6516 SEC14L1 SNHG20 SCARNA16 |
esv3641304 | Chr.17:77065524 - 77180984 on Build GRCh38 | Gain | MIR6516 SEC14L1 SNHG20 SCARNA16 |
esv3582914 | Chr.17:77086710 - 77091639 on Build GRCh38 | Loss | MIR6516 SEC14L1 SNHG20 SCARNA16 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |