Genomic Map
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Target Gene Details
Entrez Gene ID: | 81631 |
Gene Name: | microtubule associated protein 1 light chain 3 beta |
Gene Aliases: |
ATG8F, LC3B, MAP1A/1BLC3, MAP1LC3B-a |
Location: |
Chr.16:87392195-87404774 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MAP1LC3B | NM_022818.4 | NP_073729.1 | ||
| AF087871.1 | AAM10499.1 | |||
| AF183417.1 | AAG09686.1 | |||
| AF303888.1 | AAG23182.1 | |||
| AK025556.1 | BAB15169.1 | |||
| AK290956.1 | ||||
| AK310224.1 | ||||
| AK310335.1 | ||||
| AL834298.1 | CAD38970.1 | |||
| BC018634.2 | AAH18634.1 | |||
| BC041874.1 | AAH41874.1 | |||
| BC045759.1 | AAH45759.1 | |||
| BC067797.1 | AAH67797.1 | |||
| BG771621.1 | ||||
| DA577457.1 | ||||
| DB055844.1 | ||||
| JN663879.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv499n67 | Chr.16:87353978 - 87409229 on Build GRCh38 | Gain |
 ZCCHC14
FBXO31
MAP1LC3B
|
| nsv833320 | Chr.16:87315844 - 87501226 on Build GRCh38 | Gain |
C16orf95
LOC101928659
ZCCHC14
FBXO31
LOC101928737
MAP1LC3B
|
| nsv428330 | Chr.16:87336922 - 87633082 on Build GRCh38 | Gain |
ZCCHC14
FBXO31
LOC101928737
MAP1LC3B
JPH3
|
| nsv510694 | Chr.16:87276349 - 87400084 on Build GRCh38 | Deletion |
LOC101928682
C16orf95
LOC101928659
FBXO31
MAP1LC3B
|
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Additional Information:
For this assay, SNP(s) [rs111964475] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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