Assay Details
Target Gene Details
Entrez Gene ID: | 84231 |
Gene Name: | TNF receptor associated factor 7 |
Gene Aliases: |
RFWD1, RNF119 |
Location: |
Chr.16:2155752-2178129 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRAF7 | NM_032271.2 | NP_115647.2 | ||
XM_005255627.4 | XP_005255684.1 | |||
XM_011522700.1 | XP_011521002.1 | |||
AK090624.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | ATP6V0C LOC105371045 MIR6859-4 SSTR5 WASIR2 DDX11L10 TELO2 SNORA64 RHBDL1 C16orf59 LUC7L RAB26 MIR6767 TPSD1 LOC106660606 TSC2 WDR90 PRR25 BRICD5 LOC105371049 FAM173A LOC105371046 GNPTG MCRIP2 UNKL TMEM8A MIR940 CASKIN1 DECR2 PRSS27 POLR3K PDIA2 MRPS34 TSR3 CLCN7 TPSAB1 FAM234A MIR4516 RAB40C MAPK8IP3 PDPK1 TPSB2 NARFL SNORD60 SLC9A3R2 SNHG9 TPSG1 BAIAP3 CCDC78 IFT140 MIR3180-5 GFER PRR35 LOC100287175 FLJ42627 MLST8 NME3 AMDHD2 ECI1 UBE2I HS3ST6 CCDC154 METRN RPS2 MIR6768 PTX4 MIR3677 NTN3 HN1L EME2 RAB11FIP3 PGP WDR24 MIR1225 GNG13 PKD1 MIR662 TRAF7 NPW MIR5587 NME4 SNORA78 METTL26 MIR4717 SNORA10 LMF1 NTHL1 RPUSD1 HAGH TBL3 LOC729652 FBXL16 STUB1 IGFALS CCNF SOX8 RGS11 LOC100134368 ERVK13-1 HBA1 CRAMP1 LOC107987233 JMJD8 E4F1 LOC105371047 WFIKKN1 NDUFB10 MIR3177 HBM LOC101929280 SNHG19 SSTR5-AS1 RHBDF1 LOC105371038 MIR3176 RHOT2 MRPL28 LOC105371184 MEIOB SPSB3 LOC107984876 NUBP2 HBA2 HAGHL CHTF18 ABCA3 CEMP1 CACNA1H RPL23AP5 DNASE1L2 LMF1-AS1 TMEM204 KCTD5 SYNGR3 C16orf91 MIR6511B1 PIGQ HBZ NOXO1 AXIN1 LINC00254 MIR3178 TBC1D24 PRSS29P RPL3L CAPN15 RNF151 MPG MSRB1 LOC652276 FAHD1 C1QTNF8 HBQ1 LINC00235 RNPS1 ARHGDIG MSLN ABCA17P ZNF598 SNRNP25 NPRL3 NHLRC4 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | NPW ABCA3 MIR4516 MIR4717 NTHL1 TBL3 DNASE1L2 SNORD60 RAB26 SLC9A3R2 SYNGR3 MIR3180-5 GFER LOC106660606 MIR6511B1 TSC2 NOXO1 MLST8 ECI1 BRICD5 LOC105371049 MIR3677 E4F1 MIR940 CASKIN1 RNPS1 SNHG19 PGP MIR1225 ZNF598 PKD1 TRAF7 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | BRICD5 LOC105371049 MIR4516 E4F1 CASKIN1 SNHG19 DNASE1L2 SNORD60 RAB26 MIR3180-5 PGP MIR6511B1 TSC2 MIR1225 MLST8 ECI1 PKD1 TRAF7 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | BRICD5 MIR3677 E4F1 MIR940 CASKIN1 RNPS1 SNHG19 DNASE1L2 SNORD60 RAB26 PGP LOC106660606 MLST8 ECI1 TRAF7 |
nsv457349 | Chr.16:2055054 - 2200730 on Build GRCh38 | Loss | SNHG19 SNORD60 RAB26 LOC105371049 MIR3180-5 MIR6511B1 MIR4516 TSC2 MIR1225 PKD1 CASKIN1 TRAF7 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | DNASE1L2 BRICD5 PGP LOC106660606 MIR3677 MLST8 E4F1 ECI1 MIR940 CASKIN1 TRAF7 RNPS1 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | ATP6V0C ABCA3 MIR4516 MIR4717 CEMP1 LOC729652 PDPK1 C16orf59 DNASE1L2 SNORD60 RAB26 MIR6767 MIR3180-5 LOC106660606 MIR6511B1 CCNF TSC2 MLST8 AMDHD2 ECI1 MIR3178 TBC1D24 BRICD5 LOC105371049 MIR6768 LOC652276 MIR3677 NTN3 E4F1 MIR940 CASKIN1 RNPS1 SNHG19 PGP ABCA17P MIR1225 PKD1 TRAF7 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | BRICD5 ABCA3 MIR4717 MIR3677 E4F1 MIR940 CASKIN1 RNPS1 SNHG19 DNASE1L2 SNORD60 RAB26 PGP LOC106660606 MLST8 ECI1 TRAF7 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |