Assay Details
Target Gene Details
Entrez Gene ID: | 84988 |
Gene Name: | protein phosphatase 1 regulatory subunit 16A |
Gene Aliases: |
MYPT3 |
Location: |
Chr.8:144477987-144502121 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R16A | XM_005272350.2 | XP_005272407.1 | ||
XM_017013912.1 | XP_016869401.1 | |||
XM_017013913.1 | XP_016869402.1 | |||
XM_017013914.1 | XP_016869403.1 | |||
XM_017013915.1 | XP_016869404.1 | |||
AK090471.1 | BAC03452.1 | |||
BM761618.1 | ||||
BM762557.1 | ||||
CN301973.1 | ||||
DB457525.1 | ||||
HY013777.1 | ||||
HY050499.1 | ||||
HY168641.1 | ||||
HY176205.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv907n27 | Chr.8:144416180 - 144525122 on Build GRCh38 | Loss | RECQL4 MFSD3 CYHR1 PPP1R16A LRRC14 FOXH1 LOC101928953 VPS28 KIFC2 SLC39A4 TONSL-AS1 GPT MIR6893 TONSL LRRC24 |
dgv12434n54 | Chr.8:144270080 - 144516801 on Build GRCh38 | Loss | MIR6849 MIR939 PPP1R16A BOP1 SCRT1 LOC101928953 VPS28 HSF1 KIFC2 MIR1234 CPSF1 SLC39A4 TONSL-AS1 ADCK5 GPT MIR6893 TONSL FBXL6 RECQL4 MFSD3 CYHR1 TMEM249 FOXH1 LOC101928902 DGAT1 SLC52A2 MIR6848 |
nsv470249 | Chr.8:143889098 - 144519234 on Build GRCh38 | Loss | MIR6849 MIR6846 MIR939 PPP1R16A BOP1 GRINA GPAA1 SCRT1 LOC101928953 VPS28 HSF1 KIFC2 MIR1234 MIR6847 CPSF1 SLC39A4 MIR661 HGH1 TONSL-AS1 ADCK5 GPT MIR6893 MROH1 TONSL OPLAH FBXL6 RECQL4 MFSD3 CYHR1 PLEC TMEM249 LRRC14 FOXH1 SHARPIN WDR97 SMPD5 CYC1 MIR7112 SCX LOC101928902 DGAT1 PARP10 SLC52A2 MIR6848 EXOSC4 MAF1 SPATC1 |
nsv612951 | Chr.8:144479830 - 144677692 on Build GRCh38 | Loss | RECQL4 MFSD3 PPP1R16A C8orf82 ARHGAP39 GPT LRRC14 LOC101928953 LRRC24 |
nsv831489 | Chr.8:144342140 - 144544026 on Build GRCh38 | Loss | MIR6849 MIR939 PPP1R16A C8orf82 ARHGAP39 LOC101928953 VPS28 KIFC2 MIR1234 CPSF1 SLC39A4 TONSL-AS1 ADCK5 GPT MIR6893 TONSL LRRC24 FBXL6 RECQL4 MFSD3 CYHR1 TMEM249 LRRC14 FOXH1 LOC101928902 SLC52A2 |
nsv515809 | Chr.8:143904439 - 144519234 on Build GRCh38 | Gain+Loss | MIR6849 MIR6846 MIR939 PPP1R16A BOP1 GRINA GPAA1 SCRT1 LOC101928953 VPS28 HSF1 KIFC2 MIR1234 MIR6847 CPSF1 SLC39A4 MIR661 HGH1 TONSL-AS1 ADCK5 GPT MIR6893 MROH1 TONSL OPLAH FBXL6 RECQL4 MFSD3 CYHR1 PLEC TMEM249 LRRC14 FOXH1 SHARPIN WDR97 SMPD5 CYC1 MIR7112 SCX LOC101928902 DGAT1 PARP10 SLC52A2 MIR6848 EXOSC4 MAF1 SPATC1 |
dgv12439n54 | Chr.8:144438306 - 144525122 on Build GRCh38 | Loss | RECQL4 MFSD3 CYHR1 PPP1R16A TONSL-AS1 GPT LRRC14 FOXH1 LOC101928953 KIFC2 TONSL LRRC24 |
nsv612940 | Chr.8:144436292 - 144613673 on Build GRCh38 | Loss | RECQL4 MFSD3 CYHR1 PPP1R16A C8orf82 ARHGAP39 LRRC14 FOXH1 LOC101928953 KIFC2 TONSL-AS1 GPT TONSL LRRC24 |
nsv428208 | Chr.8:144041826 - 144722291 on Build GRCh38 | Gain | MIR6849 MIR6846 MIR939 PPP1R16A BOP1 C8orf82 GPAA1 ARHGAP39 SCRT1 LOC101928953 VPS28 HSF1 KIFC2 MIR1234 MIR6847 CPSF1 SLC39A4 HGH1 TONSL-AS1 ADCK5 GPT MIR6893 MROH1 TONSL LRRC24 OPLAH FBXL6 RECQL4 MFSD3 CYHR1 TMEM249 LRRC14 FOXH1 SHARPIN WDR97 SMPD5 CYC1 MIR7112 ZNF251 SCX LOC101928902 DGAT1 SLC52A2 MIR6848 EXOSC4 MAF1 SPATC1 |
esv29999 | Chr.8:144456732 - 144525122 on Build GRCh38 | Loss | RECQL4 MFSD3 CYHR1 PPP1R16A GPT LRRC14 FOXH1 LOC101928953 KIFC2 LRRC24 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |