Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | GUSBP3 LOC101928924 GTF2H2C OCLN LOC728488 |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC101929599 GUSBP3 CCDC125 NAIP LOC107986354 LOC653080 GTF2H2 SERF1B OCLN GTF2H2B SMN2 LOC101928924 SMA4 LOC107986351 RAD17 LOC728526 SMA5 GTF2H2C LOC728488 SMN1 SERF1A MARVELD2 LOC441081 AK6 CDK7 LOC647859 TAF9 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | LOC101928924 GTF2H2C OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC101929599 GUSBP3 PMCHL2 NAIP LOC102724392 LOC107986354 LOC653080 GTF2H2 SERF1B OCLN GTF2H2B SMN2 LOC101928924 SMA4 LOC107986351 RAD17 LOC728526 SMA5 GTF2H2C LOC728488 LOC107986353 SMN1 SERF1A LOC107986352 MARVELD2 GUSBP9 LOC441081 BDP1 AK6 LOC647859 TAF9 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |