Assay Details
Target Gene Details
Entrez Gene ID: | 5144 |
Gene Name: | phosphodiesterase 4D |
Gene Aliases: |
ACRDYS2, DPDE3, HSPDE4D, PDE43, PDE4DN2, STRK1 |
Location: |
Chr.5:58969038-60488098 on Build GRCh38 |
Assay Gene Location: | Within Exon 34 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PDE4D | NM_001104631.1 | 15 | 7259 | NP_001098101.1 |
NM_001165899.1 | 17 | 7150 | NP_001159371.1 | |
NM_001197218.1 | 15 | 6998 | NP_001184147.1 | |
NM_001197219.1 | 15 | 6776 | NP_001184148.1 | |
NM_001197220.1 | 15 | 7414 | NP_001184149.1 | |
NM_001197221.1 | 11 | 6734 | NP_001184150.1 | |
NM_001197222.1 | 10 | 6820 | NP_001184151.1 | |
NM_001197223.1 | 10 | 6610 | NP_001184152.1 | |
NM_006203.4 | 15 | 6802 | NP_006194.2 | |
XM_005248537.3 | 15 | 7956 | XP_005248594.1 | |
XM_005248538.4 | 16 | 9857 | XP_005248595.1 | |
XM_011543469.1 | 18 | 7239 | XP_011541771.1 | |
XM_011543470.2 | 18 | 7163 | XP_011541772.1 | |
XM_011543471.1 | 17 | 7116 | XP_011541773.1 | |
XM_011543473.1 | 17 | 7064 | XP_011541775.1 | |
XM_011543477.2 | 17 | 7066 | XP_011541779.1 | |
XM_017009565.1 | 18 | 7276 | XP_016865054.1 | |
XM_017009566.1 | 18 | 7166 | XP_016865055.1 | |
XM_017009567.1 | 16 | 6904 | XP_016865056.1 | |
XM_017009568.1 | 18 | 7150 | XP_016865057.1 | |
XM_017009569.1 | 17 | 7029 | XP_016865058.1 | |
XM_017009570.1 | 14 | 7849 | XP_016865059.1 | |
XM_017009571.1 | 17 | 7072 | XP_016865060.1 | |
AF536980.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv830312 | Chr.5:58895752 - 59086399 on Build GRCh38 | Gain | PDE4D |
More Information
Additional Information:
For this assay, SNP(s) [rs75820400,rs79996648] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |