Assay Details
Target Gene Details
Entrez Gene ID: | 80781 |
Gene Name: | collagen type XVIII alpha 1 chain |
Gene Aliases: |
KNO, KNO1, KS |
Location: |
Chr.21:45405137-45513720 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
COL18A1 | NM_130445.3 | NP_569712.2 | ||
AF018082.1 | AAC39659.1 | |||
AK130835.1 | ||||
BC063833.1 | AAH63833.1 | |||
CN389577.1 |
Target Gene Details
Entrez Gene ID: | 100874236 |
Gene Name: | COL18A1 antisense RNA 2 |
Gene Aliases: |
- |
Location: |
Chr.21:45407386-45410065 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
COL18A1-AS2 | NR_052004.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2762114 | Chr.21:45260287 - 45647830 on Build GRCh38 | Gain |
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nsv1057607 | Chr.21:45333418 - 45463244 on Build GRCh38 | Gain |
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dgv4436n100 | Chr.21:45402338 - 45556768 on Build GRCh38 | Gain |
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dgv7899n54 | Chr.21:45160455 - 45419989 on Build GRCh38 | Gain |
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nsv520123 | Chr.21:45329803 - 45410958 on Build GRCh38 | Gain |
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nsv470909 | Chr.21:45300095 - 45428674 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs112253173] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
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