Assay Details
Target Gene Details
Entrez Gene ID: | 5152 |
Gene Name: | phosphodiesterase 9A |
Gene Aliases: |
HSPDE9A2 |
Location: |
Chr.21:42653752-42775509 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3534 | Chr.21:42650074 - 42681450 on Build GRCh38 | Insertion | LOC101928255 PDE9A |
nsv522001 | Chr.21:42421796 - 42827928 on Build GRCh38 | Gain | UBASH3A LOC101928311 LOC101928284 LOC101928233 RSPH1 LOC101928255 LOC101928212 SLC37A1 PDE9A LOC101930094 |
esv2666871 | Chr.21:42615442 - 43467915 on Build GRCh38 | Deletion | LOC400870 PKNOX1 LINC00313 ERVH48-1 HSF2BP LOC101928284 U2AF1 WDR4 SIK1 LOC101928255 PDE9A LINC00322 MIR5692B CBS TCONS_00029157 LOC101928311 LINC00319 CRYAA FRGCA NDUFV3 |
nsv587655 | Chr.21:42665548 - 42680969 on Build GRCh38 | Loss | PDE9A |
esv3647086 | Chr.21:42641558 - 42685014 on Build GRCh38 | Gain | LOC101928255 PDE9A |
More Information
Additional Information:
For this assay, SNP(s) [rs149493380] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |