Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_001301726.1 | 6 | 2792 | NP_001288655.1 |
NM_006602.3 | NP_006593.2 | |||
XM_005260185.3 | XP_005260242.1 | |||
XM_011528497.2 | XP_011526799.1 | |||
XM_011528498.2 | 6 | 2533 | XP_011526800.1 | |
XM_011528499.1 | XP_011526801.1 | |||
AB012124.1 | BAA36557.1 | |||
AF070992.1 | AAD53986.1 | |||
AJ271337.1 | CAC24700.1 | |||
BC046933.1 | AAH46933.1 | |||
BU632218.1 | 1 | 90 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | OGFR LINC00659 NTSR1 MRGBP TCFL5 LOC107987285 LOC107985428 DPH3P1 OGFR-AS1 COL9A3 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | DIDO1 TCFL5 DPH3P1 COL9A3 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | GMEB2 HAR1B BHLHE23 ARFGAP1 NKAIN4 LINC01056 LOC100130152 MIR124-3 FNDC11 PTK6 SRMS LOC107985428 HAR1A OGFR-AS1 COL9A3 LOC102723788 PPDPF EEF1A2 LINC00659 YTHDF1 BIRC7 FLJ16779 CHRNA4 LOC100130587 TCFL5 LINC00029 LOC63930 MIR3196 DPH3P1 GID8 LOC107985425 COL20A1 DIDO1 MRGBP OGFR HELZ2 MIR4326 KCNQ2 SLC17A9 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | SLCO4A1 DIDO1 NTSR1 MRGBP LOC107985428 SLCO4A1-AS1 OGFR-AS1 COL9A3 OGFR LINC00659 TCFL5 LOC107987285 DPH3P1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |