Assay Details
Target Gene Details
Entrez Gene ID: | 2139 |
Gene Name: | EYA transcriptional coactivator and phosphatase 2 |
Gene Aliases: |
EAB1 |
Location: |
Chr.20:46894624-47188844 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EYA2 | NM_005244.4 | NP_005235.3 | ||
NM_172110.3 | NP_742108.2 | |||
XM_005260327.2 | XP_005260384.1 | |||
XM_017027721.1 | XP_016883210.1 | |||
AF055015.1 | AAC09362.1 | |||
AK093582.1 | ||||
AK293032.1 | ||||
AY705349.1 | AAU11525.1 | |||
BC000289.2 | AAH00289.2 | |||
BC008803.2 | AAH08803.1 | |||
BC013882.2 | AAH13882.2 | |||
BT006682.1 | AAP35328.1 | |||
U71207.1 | AAB51120.1 | |||
U81601.1 | AAB42065.1 |
Target Gene Details
Entrez Gene ID: | 100500814 |
Gene Name: | microRNA 3616 |
Gene Aliases: |
mir-3616 |
Location: |
Chr.20:47166967-47167058 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR3616 | NR_037410.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33497 | Chr.20:47143439 - 47650962 on Build GRCh38 | Loss | EYA2 MIR3616 ZMYND8 LOC100131496 NCOA3 LOC101927377 |
nsv1061899 | Chr.20:46498425 - 47439490 on Build GRCh38 | Loss | OCSTAMP EYA2 SLC2A10 MIR3616 SLC13A3 ZMYND8 TP53RK ZNF334 LOC100131496 LOC101927377 |
More Information
Additional Information:
For this assay, SNP(s) [rs78308190] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |