Assay Details
Target Gene Details
Entrez Gene ID: | 374291 |
Gene Name: | NADH:ubiquinone oxidoreductase core subunit S7 |
Gene Aliases: |
CI-20, CI-20KD, MY017, PSST |
Location: |
Chr.19:1383571-1395589 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NDUFS7 | NM_024407.4 | NP_077718.3 | ||
XM_005259556.4 | XP_005259613.2 | |||
AF060512.1 | AAG43130.1 | |||
AF115969.1 | AAP97240.1 | |||
AK056061.1 | 1 | 784 | ||
AK091024.1 | 6 | 1648 | ||
AK091046.1 | 1 | 2341 | ||
AK091623.1 | 7 | 1419 | ||
AK092169.1 | 6 | 1687 | BAC03820.1 | |
AK127759.1 | BAC87117.1 | |||
AK128713.1 | 5 | 1954 | BAC87587.1 | |
AK222738.1 | BAD96458.1 | |||
AK293917.1 | ||||
BC001715.3 | AAH01715.2 | |||
BC005954.1 | AAH05954.1 | |||
BC111517.1 | AAI11518.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv32942 | Chr.19:1320268 - 1999205 on Build GRCh38 | Gain+Loss | SCAMP4 PCSK4 MUM1 REXO1 MIR1909 ABHD17A LOC100288123 RPS15 C19orf25 PLK5 KLF16 DAZAP1 ONECUT3 UQCR11 REEP6 CSNK1G2 ADAMTSL5 GAMT ATP8B3 TCF3 MEX3D APC2 BTBD2 MBD3 CSNK1G2-AS1 ADAT3 NDUFS7 |
nsv833705 | Chr.19:1380125 - 1544934 on Build GRCh38 | Loss | PLK5 APC2 PCSK4 ADAMTSL5 DAZAP1 RPS15 C19orf25 NDUFS7 GAMT REEP6 |
nsv482207 | Chr.19:1383884 - 1395589 on Build GRCh38 | Gain | NDUFS7 |
esv3643389 | Chr.19:1264454 - 1397379 on Build GRCh38 | Gain | C19orf24 MUM1 EFNA2 CIRBP CIRBP-AS1 NDUFS7 GAMT |
esv2758743 | Chr.19:951641 - 1544934 on Build GRCh38 | Gain+Loss | C19orf24 PCSK4 MUM1 TMEM259 GPX4 LOC102725180 STK11 RPS15 C19orf25 ATP5D PLK5 POLR2E DAZAP1 SBNO2 GRIN3B REEP6 LOC105372235 WDR18 EFNA2 ARID3A CNN2 ADAMTSL5 CBARP MIDN GAMT APC2 ABCA7 CIRBP CIRBP-AS1 RNU6-2 NDUFS7 ARHGAP45 |
nsv953942 | Chr.19:1371602 - 2057401 on Build GRCh38 | Deletion | SCAMP4 PCSK4 MUM1 REXO1 MIR1909 ABHD17A LOC100288123 RPS15 C19orf25 PLK5 KLF16 DAZAP1 ONECUT3 UQCR11 REEP6 CSNK1G2 ADAMTSL5 GAMT ATP8B3 TCF3 MEX3D APC2 BTBD2 MBD3 MKNK2 CSNK1G2-AS1 ADAT3 NDUFS7 |
esv3643396 | Chr.19:1356856 - 1396468 on Build GRCh38 | Gain | MUM1 NDUFS7 |
nsv578278 | Chr.19:1371355 - 1448181 on Build GRCh38 | Loss | APC2 MUM1 DAZAP1 RPS15 NDUFS7 GAMT |
More Information
Additional Information:
For this assay, SNP(s) [rs376591934] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |