Assay Details
Target Gene Details
Entrez Gene ID: | 25759 |
Gene Name: | SHC adaptor protein 2 |
Gene Aliases: |
SCK, SHCB, SLI |
Location: |
Chr.19:416583-461011 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 13 - Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SHC2 | NM_012435.2 | NP_036567.2 | ||
XM_011527895.2 | XP_011526197.1 | |||
AB001451.1 | BAA25798.1 | |||
AL360254.1 | CAB96175.1 | |||
BY796046.2 | ||||
CF457169.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509712 | Chr.19:391096 - 558643 on Build GRCh38 | Insertion | ODF3L2 MADCAM1 GZMM CDC34 TPGS1 C2CD4C SHC2 |
dgv6155n54 | Chr.19:404077 - 519032 on Build GRCh38 | Loss | ODF3L2 MADCAM1 TPGS1 C2CD4C SHC2 |
nsv428360 | Chr.19:232069 - 702131 on Build GRCh38 | Gain | ODF3L2 PRSS57 PLPP2 RNF126 MADCAM1 CDC34 TPGS1 MIER2 FSTL3 BSG HCN2 THEG FGF22 GZMM POLRMT LOC101929060 C2CD4C SHC2 |
dgv1013e212 | Chr.19:416231 - 521269 on Build GRCh38 | Gain | ODF3L2 MADCAM1 TPGS1 SHC2 |
esv2671474 | Chr.19:393636 - 481273 on Build GRCh38 | Deletion | ODF3L2 C2CD4C SHC2 |
nsv1065558 | Chr.19:305266 - 441626 on Build GRCh38 | Gain | THEG C2CD4C MIER2 SHC2 |
dgv6153n54 | Chr.19:404026 - 423625 on Build GRCh38 | Loss | C2CD4C SHC2 |
nsv578091 | Chr.19:411849 - 431187 on Build GRCh38 | Gain | SHC2 |
nsv577978 | Chr.19:294526 - 782854 on Build GRCh38 | Gain | ODF3L2 MISP PRSS57 RNF126 MADCAM1 LOC101928450 CDC34 TPGS1 MIER2 FSTL3 BSG HCN2 THEG FGF22 PALM GZMM POLRMT LOC101929060 C2CD4C SHC2 |
nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion | MISP R3HDM4 GRIN3B GPX4 LOC101928450 TPGS1 CFD AZU1 BSG HCN2 THEG KISS1R PALM MIR4745 POLRMT SHC2 ARHGAP45 ODF3L2 PRSS57 ELANE RNF126 MADCAM1 PTBP1 CDC34 ARID3A MIR3187 TMEM259 POLR2E CNN2 FSTL3 PLPPR3 PRTN3 LOC105372235 FGF22 RNU6-2 WDR18 GZMM RNU6-9 ABCA7 C2CD4C MED16 |
nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss | MISP R3HDM4 GRIN3B LOC101928450 TPGS1 CFD AZU1 BSG HCN2 KISS1R PALM MIR4745 POLRMT SHC2 ODF3L2 PRSS57 ELANE RNF126 MADCAM1 PTBP1 CDC34 ARID3A MIR3187 FSTL3 PLPPR3 PRTN3 LOC105372235 FGF22 WDR18 GZMM RNU6-9 C2CD4C MED16 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |