Assay Details
Target Gene Details
Entrez Gene ID: | 92736 |
Gene Name: | otopetrin 2 |
Gene Aliases: |
- |
Location: |
Chr.17:74922963-74933913 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OTOP2 | XM_011525479.1 | 2 | 115 | XP_011523781.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833540 | Chr.17:74838971 - 75019365 on Build GRCh38 | Loss | FADS6 HID1-AS1 CDR2L MRPL58 GRIN2C HID1 TMEM104 USH1G OTOP2 FDXR OTOP3 |
nsv518292 | Chr.17:74810882 - 74982818 on Build GRCh38 | Loss | FADS6 HID1-AS1 GRIN2C HID1 TMEM104 USH1G OTOP2 FDXR OTOP3 |
nsv952367 | Chr.17:74751962 - 74961105 on Build GRCh38 | Deletion | FADS6 GRIN2C NAT9 HID1 TMEM104 SLC9A3R1 USH1G OTOP2 FDXR OTOP3 |
nsv576026 | Chr.17:74889500 - 74982818 on Build GRCh38 | Gain | FADS6 HID1-AS1 HID1 USH1G OTOP2 OTOP3 |
nsv1056788 | Chr.17:74922211 - 75028689 on Build GRCh38 | Gain | HID1-AS1 CDR2L MRPL58 HID1 USH1G OTOP2 OTOP3 |
More Information
Additional Information:
For this assay, SNP(s) [rs73997567] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |